RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ZBTB9Q96C00 473 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 TM4SF19Q96DZ7 209 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 PSMG3-AS1Q96PY0 264 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 BARD1Q99728 777 aaKnown RBP12.8□□□□□ -0.36
HMGN1-211ENST00000471260 ATG10Q9H0Y0 220 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 CDC42EP4Q9H3Q1 356 aaKnown RBP12.8□□□□□ -0.36
HMGN1-211ENST00000471260 ZBTB20Q9HC78 741 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-211ENST00000471260 RIC8BQ9NVN3 520 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 ARL15Q9NXU5 204 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 NSMCE4AQ9NXX6 385 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 MOCS1Q9NZB8 636 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 LUZP4Q9P127 313 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 ZFATQ9P243 1243 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 MAP10Q9P2G4 905 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 PCDHGA10Q9Y5H3 936 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 CNTRLQ7Z7A1 2325 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 IGHV1-45A0A0A0MS14 117 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 P2RX6O15547 441 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 AGFG2O95081 481 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 BMP10O95393 424 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 COX6A1P12074 109 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 TSFMP43897 325 aaKnown RBP12.79□□□□□ -0.36
HMGN1-211ENST00000471260 GLRBP48167 497 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 MGAT5Q09328 741 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 Q0VFX4 171 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 MFAP5Q13361 173 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 TLR1Q15399 786 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 PHKG1Q16816 387 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 TMEM214Q6NUQ4 689 aaKnown RBP12.79□□□□□ -0.36
HMGN1-211ENST00000471260 NIPAL1Q6NVV3 410 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 TRMT10BQ6PF06 316 aaKnown RBP12.79□□□□□ -0.36
HMGN1-211ENST00000471260 TMEM205Q6UW68 189 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 CPLX4Q7Z7G2 160 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 CUZD1Q86UP6 607 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 PACS2Q86VP3 889 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 PLD3Q8IV08 490 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 SPNS2Q8IVW8 549 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 PRSS58Q8IYP2 241 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 NKAPQ8N5F7 415 aaKnown RBP12.79□□□□□ -0.36
HMGN1-211ENST00000471260 CISD2Q8N5K1 135 aaKnown RBP12.79□□□□□ -0.36
HMGN1-211ENST00000471260 CCDC197Q8NCU1 140 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 OR4K1Q8NGD4 311 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 DNAJB14Q8TBM8 379 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 FBXL8Q96CD0 374 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 CFAP36Q96G28 342 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 SEC16BQ96JE7 1060 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 ZNF317Q96PQ6 595 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-211ENST00000471260 WDR83Q9BRX9 315 aaKnown RBP12.79□□□□□ -0.36
HMGN1-211ENST00000471260 ZNF160Q9HCG1 818 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 AGPAT4Q9NRZ5 378 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 INTS9Q9NV88 658 aaKnown RBP12.79□□□□□ -0.36
HMGN1-211ENST00000471260 MKL2Q9ULH7 1088 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 COPG1Q9Y678 874 aaKnown RBP12.79□□□□□ -0.36
HMGN1-211ENST00000471260 SLC22A7Q9Y694 548 aa12.79□□□□□ -0.36
HMGN1-211ENST00000471260 HECTD1Q9ULT8 2610 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 H0YHG0 523 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 TP73O15350 636 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 ALOX12BO75342 701 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 CBX6O95503 412 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 SHBGP04278 402 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 SERPINA7P05543 415 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 SLC35G6P0C7Q6 338 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 PRR35P0CG20 571 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 GP1BBP13224 206 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 CHN1P15882 459 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 IL10P22301 178 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 BCL6P41182 706 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 CCR8P51685 355 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 SEC24CP53992 1094 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 PDIA2Q13087 525 aaKnown RBP12.78□□□□□ -0.36
HMGN1-211ENST00000471260 PWP1Q13610 501 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 ZNF169Q14929 603 aaPredicted RBP12.78□□□□□ -0.36
HMGN1-211ENST00000471260 RASA2Q15283 850 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 PRR30Q53SZ7 412 aaPredicted RBP12.78□□□□□ -0.36
HMGN1-211ENST00000471260 HP1BP3Q5SSJ5 553 aaPredicted RBP12.78□□□□□ -0.36
HMGN1-211ENST00000471260 RPUSD3Q6P087 351 aaKnown RBP12.78□□□□□ -0.36
HMGN1-211ENST00000471260 MBOAT1Q6ZNC8 495 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 STRA8Q7Z7C7 330 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 ASPGQ86U10 573 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 ZC3HC1Q86WB0 502 aaKnown RBP12.78□□□□□ -0.36
HMGN1-211ENST00000471260 ZC3H7AQ8IWR0 971 aaKnown RBP12.78□□□□□ -0.36
HMGN1-211ENST00000471260 TBC1D19Q8N5T2 526 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 MFSD9Q8NBP5 474 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 OR9A4Q8NGU2 314 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 SLC13A3Q8WWT9 602 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 METTL21AQ8WXB1 218 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 C8orf44Q96CB5 159 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 C19orf60Q96EN9 201 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 CCDC77Q9BR77 488 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 ZNF700Q9H0M5 742 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 ANKHQ9HCJ1 492 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 LRRC4CQ9HCJ2 640 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 ASF1BQ9NVP2 202 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 LRRK2Q5S007 2527 aa12.78□□□□□ -0.36
HMGN1-211ENST00000471260 FLNCQ14315 2725 aa12.77□□□□□ -0.36
HMGN1-211ENST00000471260 DYTNA2CJ06 578 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 CDH16O75309 829 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 DNAJC8O75937 253 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-211ENST00000471260 DDAH2O95865 285 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 C8orf89P0DMQ9 161 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms