RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 VN1R5Q7Z5H4 357 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 TRABD2AQ86V40 505 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 C4orf33Q8N1A6 199 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 AMER3Q8N944 861 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 TRPV3Q8NET8 790 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 OR9A4Q8NGU2 314 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 COL26A1Q96A83 441 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 MMABQ96EY8 250 aaPredicted RBP18.76■□□□□ 0.59
HDAC7-220ENST00000471235 SLC6A16Q9GZN6 736 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 AICDAQ9GZX7 198 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 SLC26A1Q9H2B4 701 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 DCDC2Q9UHG0 476 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 ZNF490Q9ULM2 529 aaPredicted RBP18.76■□□□□ 0.59
HDAC7-220ENST00000471235 PTRH2Q9Y3E5 179 aaKnown RBP18.76■□□□□ 0.59
HDAC7-220ENST00000471235 NBEAQ8NFP9 2946 aa18.76■□□□□ 0.59
HDAC7-220ENST00000471235 CACNA1GO43497 2377 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 CDC14CA4D256 554 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 FFAR3O14843 346 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 GPR42O15529 346 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 PRPF4O43172 522 aaKnown RBP eCLIP18.75■□□□□ 0.59
HDAC7-220ENST00000471235 NSA2O95478 260 aaKnown RBP18.75■□□□□ 0.59
HDAC7-220ENST00000471235 RECKO95980 971 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 ALBP02768 609 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 KRT4P19013 534 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 TAC1P20366 129 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 GSTM2P28161 218 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 FOLR3P41439 243 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 SLC18A2Q05940 514 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 NKG7Q16617 165 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 PAGE2BQ5JRK9 111 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 TOR1AIP1Q5JTV8 583 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 GRHL2Q6ISB3 625 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 PDSS2Q86YH6 399 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 AFAP1L2Q8N4X5 818 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 TTLQ8NG68 377 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 ADAMTS17Q8TE56 1095 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 NSUN5Q96P11 429 aaKnown RBP18.75■□□□□ 0.59
HDAC7-220ENST00000471235 SPSB2Q99619 263 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 WDR54Q9H977 334 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 SLC22A7Q9Y694 548 aa18.75■□□□□ 0.59
HDAC7-220ENST00000471235 CCDC151A5D8V7 595 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 C4orf51C9J302 202 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 COPEO14579 308 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 DLX3O60479 287 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 KLHL18O94889 574 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 PROCP04070 461 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 SERPINA6P08185 405 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 CD63P08962 238 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 ZNF888P0CJ79 500 aaPredicted RBP18.74■□□□□ 0.59
HDAC7-220ENST00000471235 ATP5F1P24539 256 aaPredicted RBP18.74■□□□□ 0.59
HDAC7-220ENST00000471235 CRHR1P34998 444 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 AVPR1BP47901 424 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 OR2Y1Q8NGV0 311 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 ZNF483Q8TF39 744 aaPredicted RBP18.74■□□□□ 0.59
HDAC7-220ENST00000471235 TTC9Q92623 222 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 SEC16BQ96JE7 1060 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 C1QTNF3Q9BXJ4 246 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 RHBGQ9H310 441 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 KLHL31Q9H511 634 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 IPPKQ9H8X2 491 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 ANKHQ9HCJ1 492 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 ZBTB26Q9HCK0 441 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 MKS1Q9NXB0 559 aa18.74■□□□□ 0.59
HDAC7-220ENST00000471235 IGLV3-12A0A075B6K2 115 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 VSTM2BA6NLU5 285 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 H0YIG0 161 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 OR7A17O14581 309 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 PLIN3O60664 434 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 RDH16O75452 317 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 ERLIN1O75477 346 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 CLEC3AO75596 197 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 TBX6O95947 436 aaPredicted RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 UMODP07911 640 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 HNRNPH1P31943 449 aaKnown RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 MAT1AQ00266 395 aaKnown RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 RHDQ02161 417 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 HIST2H2ACQ16777 129 aaPredicted RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 SYT16Q17RD7 645 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 KRT71Q3SY84 523 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 HIST2H2AA3Q6FI13 130 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 MED27Q6P2C8 311 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 RPS27LQ71UM5 84 aaKnown RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 SRRM1Q8IYB3 904 aaKnown RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 LAS2Q8IYD9 372 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 OR52B6Q8NGF0 335 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 UTP15Q8TED0 518 aaKnown RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 CCT6BQ92526 530 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 APOPT1Q96IL0 206 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 CATSPER2Q96P56 530 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 ZIM3Q96PE6 472 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 TMEM237Q96Q45 408 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 C12orf65Q9H3J6 166 aaKnown RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 SOX17Q9H6I2 414 aaPredicted RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 NOL11Q9H8H0 719 aaKnown RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 ACTR8Q9H981 624 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 TRPC4Q9UBN4 977 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 ZNF282Q9UDV7 671 aaPredicted RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 NXT1Q9UKK6 140 aaKnown RBP18.73■□□□□ 0.59
HDAC7-220ENST00000471235 NAALAD2Q9Y3Q0 740 aa18.73■□□□□ 0.59
HDAC7-220ENST00000471235 DOCK10Q96BY6 2186 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms