RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 TMEM79Q9BSE2 394 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 YIPF2Q9BWQ6 316 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 VN1R1Q9GZP7 353 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 ZNF700Q9H0M5 742 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 ANKHQ9HCJ1 492 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 SLAMF7Q9NQ25 335 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 RIC8BQ9NVN3 520 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 LUZP4Q9P127 313 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 DYRK1BQ9Y463 629 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 LRRK2Q5S007 2527 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 SCN2AQ99250 2005 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 CTAGE15A4D2H0 777 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 SGK494L7N484 410 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 GALR3O60755 368 aaPredicted RBP13.29□□□□□ -0.28
COMMD3-208ENST00000470045 RDH16O75452 317 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 FAM155BO75949 473 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 PRR35P0CG20 571 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 CXCR2P25025 360 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 VARSP26640 1264 aaKnown RBP13.29□□□□□ -0.28
COMMD3-208ENST00000470045 SOX11P35716 441 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 XCR1P46094 333 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 EEF1A2Q05639 463 aaKnown RBP13.29□□□□□ -0.28
COMMD3-208ENST00000470045 HYAL2Q12891 473 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 C18orf21Q32NC0 220 aaPredicted RBP13.29□□□□□ -0.28
COMMD3-208ENST00000470045 IRAK1BP1Q5VVH5 260 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 NIPAL1Q6NVV3 410 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 RIPOR1Q6ZS17 1223 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 CTAGE6Q86UF2 777 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 CTAGE3PQ8IX95 158 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 KBTBD2Q8IY47 623 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 IQCKQ8N0W5 287 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 TCAIMQ8N3R3 496 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 SPATA6LQ8N4H0 392 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 MMGT1Q8N4V1 131 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 EFCAB3Q8N7B9 438 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 PPM1NQ8N819 430 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 PSMF1Q92530 271 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 IMMP1LQ96LU5 166 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 WDR77Q9BQA1 342 aaPredicted RBP13.29□□□□□ -0.28
COMMD3-208ENST00000470045 AIF1LQ9BQI0 150 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 UNKQ9C0B0 810 aaKnown RBP13.29□□□□□ -0.28
COMMD3-208ENST00000470045 SLC6A16Q9GZN6 736 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 HCN3Q9P1Z3 774 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 COPG2Q9UBF2 871 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 NAALAD2Q9Y3Q0 740 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 CSAG2Q9Y5P2 127 aa13.29□□□□□ -0.28
COMMD3-208ENST00000470045 USP9XQ93008 2570 aaPredicted RBP13.28□□□□□ -0.28
COMMD3-208ENST00000470045 TAPBPO15533 448 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 WDR47O94967 919 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 SERPINA7P05543 415 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 SLC35E2BP0CK96 405 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 C8orf89P0DMQ9 161 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 ALOX12P18054 663 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 GNAZP19086 355 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 IL10P22301 178 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 GDF5P43026 501 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 SRSF1Q07955 248 aaKnown RBP eCLIP13.28□□□□□ -0.28
COMMD3-208ENST00000470045 RGS1Q08116 209 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 MFAP5Q13361 173 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 EFTUD2Q15029 972 aaKnown RBP eCLIP13.28□□□□□ -0.28
COMMD3-208ENST00000470045 OR4D1Q15615 310 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 FAAH2Q6GMR7 532 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 ISLR2Q6UXK2 745 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 SLCO4C1Q6ZQN7 724 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 CUZD1Q86UP6 607 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 GPSM1Q86YR5 675 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 RELL1Q8IUW5 271 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 PDPRQ8NCN5 879 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 TRPV3Q8NET8 790 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 KIAA1191Q96A73 305 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 OR1F2PQ96R84 312 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 LANCL2Q9NS86 450 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 GPRC5BQ9NZH0 403 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 PCDHGA10Q9Y5H3 936 aa13.28□□□□□ -0.28
COMMD3-208ENST00000470045 CNTRLQ7Z7A1 2325 aa13.27□□□□□ -0.28
COMMD3-208ENST00000470045 ZNF860A6NHJ4 632 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 NCF1BA6NI72 391 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 NCF1CA8MVU1 366 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 C4orf51C9J302 202 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 VPS4BO75351 444 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 SMIM10L1P0DMW3 83 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 C1GALT1C1LP0DN25 315 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 NCF1P14598 390 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 GMPRP36959 345 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 UQCRFS1P47985 274 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 SKP1P63208 163 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 RHAGQ02094 409 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 DLG1Q12959 904 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 CDC16Q13042 620 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 DEFB134Q4QY38 66 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 SULT1C3Q6IMI6 304 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 LANCL3Q6ZV70 420 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 ABHD13Q7L211 337 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 CMC1Q7Z7K0 106 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 NOA1Q8NC60 698 aaKnown RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 OR5T3Q8NGG3 340 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 UTP15Q8TED0 518 aaKnown RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 CREB3L4Q8TEY5 395 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 SNRNP40Q96DI7 357 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms