RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CAMKVQ8NCB2 501 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF740Q8NDX6 193 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 PLPP5Q8NEB5 264 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 SCMH1Q96GD3 660 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 FRMD6Q96NE9 622 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 SPNS1Q9H2V7 528 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 MMP25Q9NPA2 562 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 KLHL42Q9P2K6 505 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 FBXO5Q9UKT4 447 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 VPS9D1Q9Y2B5 631 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 MEMO1Q9Y316 297 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 MAD1L1Q9Y6D9 718 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 NCOA6Q14686 2063 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-204ENST00000469207 TACC2O95359 2948 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 MAGEB16A2A368 324 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 ASPDHA6ND91 283 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 A8MUA0 341 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 NDC80O14777 642 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 CHST10O43529 356 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 B4GALT2O60909 372 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 BANF1O75531 89 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 CLDN14O95500 239 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 SERPIND1P05546 499 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 SP1P08047 785 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 ENO3P13929 434 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-204ENST00000469207 CD46P15529 392 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 PTGER4P35408 488 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 AGTR2P50052 363 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 NR0B1P51843 470 aaKnown RBP11.52□□□□□ -0.57
HDAC3-204ENST00000469207 CASP6P55212 293 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 CDKN2DP55273 166 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 SLC26A5P58743 744 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 USP10Q14694 798 aaKnown RBP11.52□□□□□ -0.57
HDAC3-204ENST00000469207 EXT1Q16394 746 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.52□□□□□ -0.57
HDAC3-204ENST00000469207 DEFB134Q4QY38 66 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 KRTCAP3Q53RY4 240 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 CATSPEREQ5SY80 951 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 RBM20Q5T481 1227 aaKnown RBP11.52□□□□□ -0.57
HDAC3-204ENST00000469207 MTFR2Q6P444 385 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 Q6ZPB1 254 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-204ENST00000469207 FGD2Q7Z6J4 655 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 C17orf64Q86WR6 236 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 RPS19BP1Q86WX3 136 aaKnown RBP11.52□□□□□ -0.57
HDAC3-204ENST00000469207 DOLPP1Q86YN1 238 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 CYP4X1Q8N118 509 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 MFSD9Q8NBP5 474 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 AGAP11Q8TF27 550 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 THAP3Q8WTV1 239 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-204ENST00000469207 MAIP1Q8WWC4 291 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 MAGOHBQ96A72 148 aaKnown RBP11.52□□□□□ -0.57
HDAC3-204ENST00000469207 MTFMTQ96DP5 389 aaKnown RBP11.52□□□□□ -0.57
HDAC3-204ENST00000469207 MAGED4Q96JG8 741 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 OR4K3Q96R72 315 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 LPAR4Q99677 370 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 TRIM51Q9BSJ1 452 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 LRFN1Q9P244 771 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 SLC17A6Q9P2U8 582 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 NEU2Q9Y3R4 380 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 PCDHGB6Q9Y5F9 930 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 HRH3Q9Y5N1 445 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 POLQO75417 2590 aa11.52□□□□□ -0.57
HDAC3-204ENST00000469207 GTF3C1Q12789 2109 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 ADAM10O14672 748 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 NDUFS4O43181 175 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 OR1F1O43749 312 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 MLNP12872 115 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 HRH2P25021 359 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 TPP2P29144 1249 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-204ENST00000469207 CDC25BP30305 580 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 RFC3P40938 356 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 HNF4AP41235 474 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 SMSP52788 366 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 LCTLQ6UWM7 567 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 ELP5Q8TE02 316 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 THAP11Q96EK4 314 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 PTCHD1Q96NR3 888 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 SGPP1Q9BX95 441 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 PARVBQ9HBI1 364 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 TRMT6Q9UJA5 497 aaKnown RBP11.51□□□□□ -0.57
HDAC3-204ENST00000469207 IKZF3Q9UKT9 509 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 ASB1Q9Y576 335 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 SLC22A7Q9Y694 548 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 CELSR1Q9NYQ6 3014 aa11.51□□□□□ -0.57
HDAC3-204ENST00000469207 MAGEB17A8MXT2 336 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 GALR3O60755 368 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-204ENST00000469207 AHSGP02765 367 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 FHP07954 510 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 ZNF888P0CJ79 500 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-204ENST00000469207 ABOP16442 354 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 MAOAP21397 527 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 PTGER1P34995 402 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 MAGEA3P43357 314 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 RAB8AP61006 207 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 HYAL2Q12891 473 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 PCGF5Q86SE9 256 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 AFAP1L2Q8N4X5 818 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 NAT8LQ8N9F0 302 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 TMEM178AQ8NBL3 297 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 MCUQ8NE86 351 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms