RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 PEX11GQ96HA9 241 aa21.44■■□□□ 1.02
USP42-205ENST00000465073 SIGLEC12Q96PQ1 595 aa21.44■■□□□ 1.02
USP42-205ENST00000465073 SARGQ9BW04 601 aa21.44■■□□□ 1.02
USP42-205ENST00000465073 LANCL2Q9NS86 450 aa21.44■■□□□ 1.02
USP42-205ENST00000465073 SH3BGRL2Q9UJC5 107 aa21.44■■□□□ 1.02
USP42-205ENST00000465073 PPP2R2CQ9Y2T4 447 aa21.44■■□□□ 1.02
USP42-205ENST00000465073 WISP2O76076 250 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 CD46P15529 392 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 EEF1DP29692 281 aaKnown RBP21.43■■□□□ 1.02
USP42-205ENST00000465073 PTGER4P35408 488 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 CCR8P51685 355 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 TAS2R50P59544 299 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 DHX9Q08211 1270 aaKnown RBP21.43■■□□□ 1.02
USP42-205ENST00000465073 CRYMQ14894 314 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 PHKG1Q16816 387 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 LGI4Q8N135 537 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 AFAP1L2Q8N4X5 818 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 OR4K1Q8NGD4 311 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 GRK7Q8WTQ7 553 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 LINGO1Q96FE5 620 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 SCMH1Q96GD3 660 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 GPR137Q96N19 417 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 NPAS2Q99743 824 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 KLHL1Q9NR64 748 aa21.43■■□□□ 1.02
USP42-205ENST00000465073 CDK2AP1O14519 115 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 CDC123O75794 336 aaPredicted RBP21.42■■□□□ 1.02
USP42-205ENST00000465073 TTC4O95801 387 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 CDKN2DP55273 166 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 SKP1P63208 163 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 ALDH6A1Q02252 535 aaKnown RBP21.42■■□□□ 1.02
USP42-205ENST00000465073 PWP1Q13610 501 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 USP10Q14694 798 aaKnown RBP21.42■■□□□ 1.02
USP42-205ENST00000465073 DUPD1Q68J44 220 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 NIPAL1Q6NVV3 410 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 KIAA0408Q6ZU52 694 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 TBC1D19Q8N5T2 526 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 TMEM178AQ8NBL3 297 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 MAGED4Q96JG8 741 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 ANKRD10Q9NXR5 420 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 ARL15Q9NXU5 204 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 ZNF835Q9Y2P0 537 aa21.42■■□□□ 1.02
USP42-205ENST00000465073 ASPDHA6ND91 283 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 PABPN1LA6NDY0 278 aaKnown RBP21.41■■□□□ 1.02
USP42-205ENST00000465073 ZNF860A6NHJ4 632 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 FAM227AF5H4B4 570 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 PGRMC1O00264 195 aaKnown RBP21.41■■□□□ 1.02
USP42-205ENST00000465073 OR1F1O43749 312 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 GALR3O60755 368 aaPredicted RBP21.41■■□□□ 1.02
USP42-205ENST00000465073 FHP07954 510 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 ESRRAP11474 423 aaPredicted RBP21.41■■□□□ 1.02
USP42-205ENST00000465073 AGAP20933 346 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 GABRB3P28472 473 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 OR4D2P58180 307 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 IL2P60568 153 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 C3AR1Q16581 482 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 RNASEH2BQ5TBB1 312 aaKnown RBP21.41■■□□□ 1.02
USP42-205ENST00000465073 SPINK14Q6IE38 97 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 STRA8Q7Z7C7 330 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 ZNF740Q8NDX6 193 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 OR5T3Q8NGG3 340 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 OR56A3Q8NH54 315 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 TBC1D20Q96BZ9 403 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 SNF8Q96H20 258 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 RBCK1Q9BYM8 510 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 TRIM54Q9BYV2 358 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 SCN3AQ9NY46 2000 aa21.41■■□□□ 1.02
USP42-205ENST00000465073 TRBC2A0A5B9 178 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 GABRR3A8MPY1 467 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 NDUFS4O43181 175 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 MAN1A2O60476 641 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 AHSGP02765 367 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 JAK1P23458 1154 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 FNTAP49354 379 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 SMSP52788 366 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 AP1S2P56377 157 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 SLC26A5P58743 744 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 CCZ1BP86790 482 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 CCZ1P86791 482 aaPredicted RBP21.4■■□□□ 1.02
USP42-205ENST00000465073 OC90Q02509 493 aaPredicted RBP21.4■■□□□ 1.02
USP42-205ENST00000465073 RBM20Q5T481 1227 aaKnown RBP21.4■■□□□ 1.02
USP42-205ENST00000465073 Q6ZPB1 254 aaPredicted RBP21.4■■□□□ 1.02
USP42-205ENST00000465073 TSLPQ969D9 159 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 NAT9Q9BTE0 207 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 HES7Q9BYE0 225 aa21.4■■□□□ 1.02
USP42-205ENST00000465073 CHST10O43529 356 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 NRDCO43847 1150 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 TSPAN12O95859 305 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 SP1P08047 785 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 ALOX12P18054 663 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 ZXDCQ2QGD7 858 aaPredicted RBP21.39■■□□□ 1.02
USP42-205ENST00000465073 DEFB134Q4QY38 66 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 SPANXN3Q5MJ09 141 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 GDF7Q7Z4P5 450 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 GALNT7Q86SF2 657 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 SPPL2CQ8IUH8 684 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 CNTN4Q8IWV2 1026 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 FAM98AQ8NCA5 519 aaKnown RBP21.39■■□□□ 1.02
USP42-205ENST00000465073 ATL1Q8WXF7 558 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 PYCR2Q96C36 320 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 FBXL8Q96CD0 374 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms