RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 KLK8O60259 260 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 CTAG2O75638 210 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 XCR1P46094 333 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 ADAM8P78325 824 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 PMPCAQ10713 525 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 TSTA3Q13630 321 aaPredicted RBP16.18■□□□□ 0.18
TOP3A-202ENST00000461127 PPP1R7Q15435 360 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 AARS2Q5JTZ9 985 aaKnown RBP16.18■□□□□ 0.18
TOP3A-202ENST00000461127 OTOAQ7RTW8 1153 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 LINC00523Q86TU6 105 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 RPS19BP1Q86WX3 136 aaKnown RBP16.18■□□□□ 0.18
TOP3A-202ENST00000461127 ARHGEF39Q8N4T4 335 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 CCDC89Q8N998 374 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 OR9A4Q8NGU2 314 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 OR51Q1Q8NH59 317 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 SMPDL3AQ92484 453 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 SEC16BQ96JE7 1060 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 KLF13Q9Y2Y9 288 aaPredicted RBP16.18■□□□□ 0.18
TOP3A-202ENST00000461127 NSD1Q96L73 2696 aaPredicted RBP16.18■□□□□ 0.18
TOP3A-202ENST00000461127 KLRC4-KLRK1H3BQV0 150 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 PRMT5O14744 637 aaPredicted RBP16.17■□□□□ 0.18
TOP3A-202ENST00000461127 NSA2O95478 260 aaKnown RBP16.17■□□□□ 0.18
TOP3A-202ENST00000461127 IFNB1P01574 187 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 TFEBP19484 476 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 STIP1P31948 543 aaKnown RBP16.17■□□□□ 0.18
TOP3A-202ENST00000461127 MEOX1P50221 254 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 PRAMEP78395 509 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 RELAQ04206 551 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 P3H1Q32P28 736 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 GLE1Q53GS7 698 aaKnown RBP16.17■□□□□ 0.18
TOP3A-202ENST00000461127 SFT2D3Q587I9 215 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 ARHGAP11AQ6P4F7 1023 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 SUSD1Q6UWL2 747 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 SYDE1Q6ZW31 735 aaPredicted RBP16.17■□□□□ 0.18
TOP3A-202ENST00000461127 CAMKMTQ7Z624 323 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 ADCK2Q7Z695 626 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 FAM71DQ8N9W8 422 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 OR13J1Q8NGT2 312 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 GOT1L1Q8NHS2 421 aaPredicted RBP16.17■□□□□ 0.18
TOP3A-202ENST00000461127 SLC6A16Q9GZN6 736 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 CLEC4MQ9H2X3 399 aaPredicted RBP16.17■□□□□ 0.18
TOP3A-202ENST00000461127 LIME1Q9H400 295 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 RUVBL2Q9Y230 463 aaKnown RBP16.17■□□□□ 0.18
TOP3A-202ENST00000461127 PLEKHA6Q9Y2H5 1048 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 HRH3Q9Y5N1 445 aa16.17■□□□□ 0.18
TOP3A-202ENST00000461127 PHF3Q92576 2039 aaKnown RBP16.17■□□□□ 0.18
TOP3A-202ENST00000461127 FAM187AA6NFU0 413 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 P2RX6O15547 441 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 PROM1O43490 865 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 RAD51CO43502 376 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 HS6ST1O60243 411 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 MRPS25P82663 173 aaKnown RBP16.16■□□□□ 0.18
TOP3A-202ENST00000461127 PRDX1Q06830 199 aaKnown RBP16.16■□□□□ 0.18
TOP3A-202ENST00000461127 NSDHLQ15738 373 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 ICE2Q659A1 982 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 ZNF425Q6IV72 752 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 PAOXQ6QHF9 649 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 OR5M3Q8NGP4 307 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 OR9A1PQ8NGU1 263 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 SLCO2A1Q92959 643 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 LRRC1Q9BTT6 524 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 REPIN1Q9BWE0 567 aaKnown RBP16.16■□□□□ 0.18
TOP3A-202ENST00000461127 SYNPO2LQ9H987 977 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 ZNF358Q9NW07 568 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 HCN3Q9P1Z3 774 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 TAC3Q9UHF0 121 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 L3MBTL1Q9Y468 752 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 DNAJC13O75165 2243 aa16.16■□□□□ 0.18
TOP3A-202ENST00000461127 IGKV1-8A0A0C4DH67 115 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 ZNF839A8K0R7 811 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 KRT14P02533 472 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 RHOXF2BP0C7M4 288 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 TPP2P29144 1249 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-202ENST00000461127 ADSLP30566 484 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-202ENST00000461127 TTPAP49638 278 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 NUP107P57740 925 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 CDH17Q12864 832 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 USP10Q14694 798 aaKnown RBP16.15■□□□□ 0.18
TOP3A-202ENST00000461127 ARHGAP19Q14CB8 494 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 ABRAXAS2Q15018 415 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 ANKRD20A4Q4UJ75 823 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 TSTD2Q5T7W7 516 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 ZNF468Q5VIY5 522 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-202ENST00000461127 Q71RC1 249 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-202ENST00000461127 PCGF5Q86SE9 256 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 ZZZ3Q8IYH5 903 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 OR10Q1Q8NGQ4 319 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 EBNA1BP2Q99848 306 aaKnown RBP16.15■□□□□ 0.18
TOP3A-202ENST00000461127 RHOXF2Q9BQY4 288 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 GPATCH1Q9BRR8 931 aaKnown RBP16.15■□□□□ 0.18
TOP3A-202ENST00000461127 RAB17Q9H0T7 212 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 TRIM45Q9H8W5 580 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-202ENST00000461127 SLC2A6Q9UGQ3 507 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 RIMKLBQ9ULI2 386 aa16.15■□□□□ 0.18
TOP3A-202ENST00000461127 OR2W5A6NFC9 320 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 FCHO1O14526 889 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 METTL18O95568 372 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 ERGP11308 486 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 HSD17B2P37059 387 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 RFC3P40938 356 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms