RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 HSD3B2P26439 372 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 TUBB8Q3ZCM7 444 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 MED25Q71SY5 747 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 GOLGA7Q7Z5G4 137 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 OR4N4Q8N0Y3 316 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 ENDOVQ8N8Q3 282 aaKnown RBP10.18□□□□□ -0.78
UBR4-208ENST00000459947 ZNF483Q8TF39 744 aaPredicted RBP10.18□□□□□ -0.78
UBR4-208ENST00000459947 PGM2Q96G03 612 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 C10orf90Q96M02 699 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 QRFPRQ96P65 431 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 SERPINI1Q99574 410 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 TCFL5Q9UL49 500 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 MRPS33Q9Y291 106 aaKnown RBP10.18□□□□□ -0.78
UBR4-208ENST00000459947 SMIM23A6NLE4 172 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 A8MT66 165 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 SEMA3DO95025 777 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 IMPDH1P20839 514 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 SLCO1A2P46721 670 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 PGGT1BP53609 377 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 CATSPEREQ5SY80 951 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 MRPL14Q6P1L8 145 aaKnown RBP10.18□□□□□ -0.78
UBR4-208ENST00000459947 AFAP1L2Q8N4X5 818 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 CCDC63Q8NA47 563 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 MIEF2Q96C03 454 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 TBCDQ9BTW9 1192 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 UNKQ9C0B0 810 aaKnown RBP10.18□□□□□ -0.78
UBR4-208ENST00000459947 PFDN4Q9NQP4 134 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 SNX6Q9UNH7 406 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 ERVH48-1M5A8F1 160 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 KRT6AP02538 564 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 KRT6BP04259 564 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 KRT6CP48668 564 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 IFT88Q13099 833 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 BIKQ13323 160 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 VASH2Q86V25 355 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 ARMC2Q8NEN0 867 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 ZNF382Q96SR6 550 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 IPPKQ9H8X2 491 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 WDR70Q9NW82 654 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 PCTPQ9UKL6 214 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 TK2O00142 265 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 FOXE1O00358 373 aaPredicted RBP10.17□□□□□ -0.78
UBR4-208ENST00000459947 CTIFO43310 598 aaKnown RBP10.17□□□□□ -0.78
UBR4-208ENST00000459947 PLIN3O60664 434 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 PROCP04070 461 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 CCR10P46092 362 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 TOR1AIP1Q5JTV8 583 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 SHCBP1LQ9BZQ2 653 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 TMEM216Q9P0N5 145 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 LHX6Q9UPM6 363 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 PTRH2Q9Y3E5 179 aaKnown RBP10.17□□□□□ -0.78
UBR4-208ENST00000459947 VSTM2BA6NLU5 285 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 PSMD12O00232 456 aaPredicted RBP10.17□□□□□ -0.78
UBR4-208ENST00000459947 WFS1O76024 890 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 PTX3P26022 381 aaPredicted RBP10.17□□□□□ -0.78
UBR4-208ENST00000459947 RBBP7Q16576 425 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 CFAP157Q5JU67 520 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 IRAK1BP1Q5VVH5 260 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 MLIPQ5VWP3 458 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 MILR1Q7Z6M3 343 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 OR2L5Q8NG80 312 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 CCT6BQ92526 530 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 MMABQ96EY8 250 aaPredicted RBP10.17□□□□□ -0.78
UBR4-208ENST00000459947 SERINC2Q96SA4 455 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 ACTL8Q9H568 366 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 DHCR7Q9UBM7 475 aaKnown RBP10.17□□□□□ -0.78
UBR4-208ENST00000459947 HEATR5BQ9P2D3 2071 aa10.17□□□□□ -0.78
UBR4-208ENST00000459947 TM9SF1O15321 606 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 B3GALT2O43825 422 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 KLHL18O94889 574 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 SERPIND1P05546 499 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 RNH1P13489 461 aaKnown RBP10.16□□□□□ -0.78
UBR4-208ENST00000459947 CPA3P15088 417 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 KRT4P19013 534 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 GDF5P43026 501 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 KCNC1P48547 511 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 TGIF1Q15583 401 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 ADPRMQ3LIE5 342 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 C1orf189Q5VU69 101 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 BORAQ6PGQ7 559 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.16□□□□□ -0.78
UBR4-208ENST00000459947 IQCKQ8N0W5 287 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 TMEM102Q8N9M5 508 aaPredicted RBP10.16□□□□□ -0.78
UBR4-208ENST00000459947 SH2B3Q9UQQ2 575 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 MMACHCQ9Y4U1 282 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 SNRNP200O75643 2136 aaKnown RBP10.16□□□□□ -0.78
UBR4-208ENST00000459947 CDC14CA4D256 554 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 E2F3O00716 465 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 CDK2AP1O14519 115 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 GALR3O60755 368 aaPredicted RBP10.16□□□□□ -0.78
UBR4-208ENST00000459947 ARL1P40616 181 aaPredicted RBP10.16□□□□□ -0.78
UBR4-208ENST00000459947 AGTR2P50052 363 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 LCP2Q13094 533 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 ZXDCQ2QGD7 858 aaPredicted RBP10.16□□□□□ -0.78
UBR4-208ENST00000459947 COL28A1Q2UY09 1125 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 CEP85LQ5SZL2 805 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 TTC19Q6DKK2 380 aaPredicted RBP10.16□□□□□ -0.78
UBR4-208ENST00000459947 METTL21AQ8WXB1 218 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 KCNC2Q96PR1 638 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 LYARQ9NX58 379 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms