RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 CHSY3Q70JA7 882 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 BPHLQ86WA6 291 aaPredicted RBP13.48□□□□□ -0.25
LINC00887-204ENST00000456816 RNF175Q8N4F7 328 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 WDR20Q8TBZ3 569 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 NT5CQ8TCD5 201 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 ZNF473Q8WTR7 871 aaKnown RBP13.48□□□□□ -0.25
LINC00887-204ENST00000456816 TWIST2Q8WVJ9 160 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 RNF31Q96EP0 1072 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 C7orf26Q96N11 449 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 TAAR9Q96RI9 348 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 NDC1Q9BTX1 674 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 SYNPO2LQ9H987 977 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 APMAPQ9HDC9 416 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 SLCO1B3Q9NPD5 702 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 FBXO8Q9NRD0 319 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 TXLNGQ9NUQ3 528 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 NMRK1Q9NWW6 199 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 NDOR1Q9UHB4 597 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 SLC12A4Q9UP95 1085 aa13.48□□□□□ -0.25
LINC00887-204ENST00000456816 RUVBL1Q9Y265 456 aaKnown RBP13.48□□□□□ -0.25
LINC00887-204ENST00000456816 PCM1Q15154 2024 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 HYKKA2RU49 373 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 PMS2P1A4D2B8 440 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 FOXE1O00358 373 aaPredicted RBP13.47□□□□□ -0.25
LINC00887-204ENST00000456816 SCRG1O75711 98 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 TNFSF15O95150 251 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 SERPINA6P08185 405 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 FGF4P08620 206 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 LINC00032P0C843 101 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 PTX3P26022 381 aaPredicted RBP13.47□□□□□ -0.25
LINC00887-204ENST00000456816 RBMS1P29558 406 aaKnown RBP13.47□□□□□ -0.25
LINC00887-204ENST00000456816 ETV5P41161 510 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 GNGT1P63211 74 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 CSTF3Q12996 717 aaKnown RBP13.47□□□□□ -0.25
LINC00887-204ENST00000456816 COL9A2Q14055 689 aaPredicted RBP13.47□□□□□ -0.25
LINC00887-204ENST00000456816 ABRAXAS2Q15018 415 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 FAM214AQ32MH5 1076 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 SPDYAQ5MJ70 313 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 ATG14Q6ZNE5 492 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 RGS9BPQ6ZS82 235 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 ABHD13Q7L211 337 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 VN1R5Q7Z5H4 357 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 BMPERQ8N8U9 685 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 KCT2Q8NC54 265 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 CREB3L4Q8TEY5 395 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 USP7Q93009 1102 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 CLIP3Q96DZ5 547 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 PPP1R36Q96LQ0 422 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 SERPINI1Q99574 410 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 ASPSCR1Q9BZE9 553 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 ULBP3Q9BZM4 244 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 REXO4Q9GZR2 422 aaKnown RBP13.47□□□□□ -0.25
LINC00887-204ENST00000456816 OR51B5Q9H339 312 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 POLR1BQ9H9Y6 1135 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 FAM53CQ9NYF3 392 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 SRPK3Q9UPE1 567 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 TSC22D4Q9Y3Q8 395 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 DNAJC15Q9Y5T4 150 aa13.47□□□□□ -0.25
LINC00887-204ENST00000456816 SLCO1B7G3V0H7 640 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 SLC28A1O00337 649 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 SAP18O00422 153 aaKnown RBP13.46□□□□□ -0.25
LINC00887-204ENST00000456816 PIP5K1BO14986 540 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 ZNF749O43361 778 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 ERI3O43414 337 aaKnown RBP13.46□□□□□ -0.25
LINC00887-204ENST00000456816 RGS14O43566 566 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 ZNF888P0CJ79 500 aaPredicted RBP13.46□□□□□ -0.25
LINC00887-204ENST00000456816 FGF5P12034 268 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 HSD3B1P14060 373 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 ALAS2P22557 587 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 HSD3B2P26439 372 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 PLA2G16P53816 162 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 ARSFP54793 590 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 RAB8AP61006 207 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 ZNF33BQ06732 778 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 MUM1Q2TAK8 710 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 PRTGQ2VWP7 1150 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC00887-204ENST00000456816 TMEM35AQ53FP2 167 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 MANEAQ5SRI9 462 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 PRAMEF17Q5VTA0 474 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 KHDRBS2Q5VWX1 349 aaKnown RBP13.46□□□□□ -0.25
LINC00887-204ENST00000456816 PWWP2BQ6NUJ5 590 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 TRIM40Q6P9F5 258 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 WDR75Q8IWA0 830 aaKnown RBP13.46□□□□□ -0.25
LINC00887-204ENST00000456816 GBP7Q8N8V2 638 aaPredicted RBP13.46□□□□□ -0.25
LINC00887-204ENST00000456816 PIWIL2Q8TC59 973 aaKnown RBP13.46□□□□□ -0.25
LINC00887-204ENST00000456816 TM4SF19Q96DZ7 209 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 ZNF285Q96NJ3 590 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 TEFMQ96QE5 360 aaKnown RBP13.46□□□□□ -0.25
LINC00887-204ENST00000456816 F2RL3Q96RI0 385 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 ZPBPQ9BS86 351 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 DDA1Q9BW61 102 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 MS4A8Q9BY19 250 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 SLC6A16Q9GZN6 736 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 ACTR5Q9H9F9 607 aaPredicted RBP13.46□□□□□ -0.25
LINC00887-204ENST00000456816 COPS7BQ9H9Q2 264 aaPredicted RBP13.46□□□□□ -0.25
LINC00887-204ENST00000456816 BRF2Q9HAW0 419 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 ANKHQ9HCJ1 492 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 CUTCQ9NTM9 273 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 RIC8BQ9NVN3 520 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms