RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 PRAMEF4O60810 478 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 RDH16O75452 317 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 KLHL18O94889 574 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 ALPPP05187 535 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 HEXBP07686 556 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 SMIM10L1P0DMW3 83 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 C1GALT1C1LP0DN25 315 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 VARSP26640 1264 aaKnown RBP13.77□□□□□ -0.21
HSPG2-207ENST00000453796 SLMAPQ14BN4 828 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 HERC3Q15034 1050 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 PCOLCEQ15113 449 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 FBXO48Q5FWF7 155 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 PRAMEF9Q5VWM5 478 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 FAAH2Q6GMR7 532 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 SULT1C3Q6IMI6 304 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 NDUFAF7Q7L592 441 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 ISCA2Q86U28 154 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 TCAIMQ8N3R3 496 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 TBC1D19Q8N5T2 526 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 CREB3L4Q8TEY5 395 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 PNPLA2Q96AD5 504 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 SMIM10Q96HG1 83 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 ATOH8Q96SQ7 321 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 MFRPQ9BY79 579 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 AICDAQ9GZX7 198 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 LHPPQ9H008 270 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 CDC42EP4Q9H3Q1 356 aaKnown RBP13.77□□□□□ -0.21
HSPG2-207ENST00000453796 ACSS3Q9H6R3 686 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 ZNF160Q9HCG1 818 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 IGSF5Q9NSI5 407 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 GPRC5BQ9NZH0 403 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 HCN3Q9P1Z3 774 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 MTRF1LQ9UGC7 380 aaKnown RBP13.77□□□□□ -0.21
HSPG2-207ENST00000453796 MKL2Q9ULH7 1088 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 PLAAQ9Y263 795 aa13.77□□□□□ -0.21
HSPG2-207ENST00000453796 C4orf51C9J302 202 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 DNAJB6O75190 326 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 B3GALT4O96024 378 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 ALOX12P18054 663 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 GNAZP19086 355 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 TFEBP19484 476 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 CRABP2P29373 138 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 XCR1P46094 333 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 HSPA7P48741 367 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 EEF1A2Q05639 463 aaKnown RBP13.76□□□□□ -0.21
HSPG2-207ENST00000453796 RGS1Q08116 209 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 CDC16Q13042 620 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 PLEKHN1Q494U1 663 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-207ENST00000453796 CEP128Q6ZU80 1094 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 CENPLQ8N0S6 344 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-207ENST00000453796 TRPV3Q8NET8 790 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 KIF18AQ8NI77 898 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 UTP15Q8TED0 518 aaKnown RBP13.76□□□□□ -0.21
HSPG2-207ENST00000453796 PSMF1Q92530 271 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 ESAMQ96AP7 390 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 THOC3Q96J01 351 aaKnown RBP13.76□□□□□ -0.21
HSPG2-207ENST00000453796 CYTH2Q99418 400 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 FMO2Q99518 471 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 ZNF700Q9H0M5 742 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 LANCL2Q9NS86 450 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 DNAJC11Q9NVH1 559 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 WWOXQ9NZC7 414 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 ASB1Q9Y576 335 aa13.76□□□□□ -0.21
HSPG2-207ENST00000453796 NSG1A0A0A6YYJ2 146 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 ZNF860A6NHJ4 632 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 TTLL8A6PVC2 850 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 TBX6O95947 436 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-207ENST00000453796 C2P06681 752 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 SERPINA6P08185 405 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 LTA4HP09960 611 aaKnown RBP13.75□□□□□ -0.21
HSPG2-207ENST00000453796 PRR35P0CG20 571 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 ZNF888P0CJ79 500 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-207ENST00000453796 EPORP19235 508 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 CXCR2P25025 360 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 PHBP35232 272 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 BMPR2Q13873 1038 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 E2F2Q14209 437 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 RBBP5Q15291 538 aaKnown RBP13.75□□□□□ -0.21
HSPG2-207ENST00000453796 MROH9Q5TGP6 573 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 Q6ZS92 163 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 LANCL3Q6ZV70 420 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 RAPH1Q70E73 1250 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 CCDC91Q7Z6B0 441 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 TBC1D1Q86TI0 1168 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-207ENST00000453796 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.75□□□□□ -0.21
HSPG2-207ENST00000453796 AMER2Q8N7J2 671 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 OR5T3Q8NGG3 340 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 STAG3L4Q8TBR4 150 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 CPT1CQ8TCG5 803 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 KCTD4Q8WVF5 259 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 NXNL1Q96CM4 212 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 WDR34Q96EX3 536 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 IMMP1LQ96LU5 166 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 OR1F2PQ96R84 312 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 CAPS2Q9BXY5 557 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 TSPYL1Q9H0U9 437 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 EHD1Q9H4M9 534 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 KLHL31Q9H511 634 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 ALG9Q9H6U8 611 aa13.75□□□□□ -0.21
HSPG2-207ENST00000453796 NT5DC2Q9H857 520 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms