RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 TARBP2Q15633 366 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 NPY5RQ15761 445 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ATP6AP1Q15904 470 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ETFDHQ16134 617 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 KCNMB1Q16558 191 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 BAK1Q16611 211 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CA9Q16790 459 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 COL28A1Q2UY09 1125 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ADPRMQ3LIE5 342 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 KLHL12Q53G59 568 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 HSD17B12Q53GQ0 312 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 C2CD6Q53TS8 623 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CDKL4Q5MAI5 379 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 RBM48Q5RL73 367 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TEDDM1Q5T9Z0 273 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ATPAF1Q5TC12 328 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ANXA8L1Q5VT79 327 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 FAM171A1Q5VUB5 890 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CES4AQ5XG92 561 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 LRRC66Q68CR7 880 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TANGO2Q6ICL3 276 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PYHIN1Q6K0P9 492 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 C8orf82Q6P1X6 216 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TTC33Q6PID6 262 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZNF517Q6ZMY9 492 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 C1orf122Q6ZSJ8 110 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 H2AFVQ71UI9 128 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC26A9Q7LBE3 791 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 STRADAQ7RTN6 431 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZNF571Q7Z3V5 609 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PIWIL3Q7Z3Z3 882 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 LUZP2Q86TE4 346 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CCDC190Q86UF4 302 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC13A5Q86YT5 568 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SNX29P2Q8IUI4 249 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PLXDC1Q8IUK5 500 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 EPHX4Q8IUS5 362 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 FAM217AQ8IXS0 508 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PGAM4Q8N0Y7 254 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 NAGSQ8N159 534 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PDIK1LQ8N165 341 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 THEM5Q8N1Q8 247 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PYROXD2Q8N2H3 581 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 GUF1Q8N442 669 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SFRP1Q8N474 314 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 C4orf32Q8N8J7 132 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 NIPA2Q8N8Q9 360 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TTC29Q8NA56 475 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PLA2G15Q8NCC3 412 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CHDHQ8NE62 594 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC24A4Q8NFF2 622 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 BPIFB6Q8NFQ5 453 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 OR1M1Q8NGA1 313 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 STT3BQ8TCJ2 826 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 DCAKDQ8WVC6 231 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ST8SIA2Q92186 375 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 HTRA1Q92743 480 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PROX1Q92786 737 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 HAS1Q92839 578 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TCEAL3Q969E4 200 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLCO4A1Q96BD0 722 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 LRRC39Q96DD0 335 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ASB9Q96DX5 294 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZC3HAV1LQ96H79 300 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 VPS39Q96JC1 886 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC45A3Q96JT2 553 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZFYVE19Q96K21 471 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZNF668Q96K58 619 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 FAM84AQ96KN4 292 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 C10orf90Q96M02 699 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 OR2A14Q96R47 310 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SIGLEC11Q96RL6 698 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CPXM1Q96SM3 734 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 AGAP2Q99490 1192 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 APOL4Q9BPW4 351 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 KCTD14Q9BQ13 255 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TTYH2Q9BSA4 534 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 INPP5KQ9BT40 448 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 MED18Q9BUE0 208 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TRIM62Q9BVG3 475 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 HDHD5Q9BXW7 423 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 GPR63Q9BZJ6 419 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TRIM31Q9BZY9 425 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZYG11BQ9C0D3 744 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC22A4Q9H015 551 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CHST8Q9H2A9 424 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TRPV4Q9HBA0 871 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TMEM8AQ9HCN3 771 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 XPNPEP1Q9NQW7 623 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 BIN3Q9NQY0 253 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 POLE4Q9NR33 117 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 NUDT15Q9NV35 164 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 EXD2Q9NVH0 621 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 LYARQ9NX58 379 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 THUMPD1Q9NXG2 353 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 DPP3Q9NY33 737 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TAS2R9Q9NYW1 312 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 UXTQ9UBK9 157 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 OPTCQ9UBM4 332 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms