RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 FAM196AQ6ZSG2 479 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 MOB2Q70IA6 237 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 LRRC8DQ7L1W4 858 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 CUZD1Q86UP6 607 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 OR4F6Q8NGB9 312 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 ZNF384Q8TF68 577 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 DIRAS2Q96HU8 199 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 ITCHQ96J02 903 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 CCDC115Q96NT0 180 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 KCTD15Q96SI1 283 aaPredicted RBP10.39□□□□□ -0.75
LINC00342-202ENST00000448494 PITX2Q99697 317 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 HSD17B14Q9BPX1 270 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 GORASP2Q9H8Y8 452 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 SDR39U1Q9NRG7 319 aaPredicted RBP10.39□□□□□ -0.75
LINC00342-202ENST00000448494 ING1Q9UK53 422 aaPredicted RBP10.39□□□□□ -0.75
LINC00342-202ENST00000448494 NDRG2Q9UN36 371 aaKnown RBP10.39□□□□□ -0.75
LINC00342-202ENST00000448494 CNTN6Q9UQ52 1028 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 PAPPAQ13219 1627 aa10.39□□□□□ -0.75
LINC00342-202ENST00000448494 C9orf170A2RU37 121 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 SPDYE2BA6NHP3 402 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 PPEF2O14830 753 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 TO15178 435 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 EEDO75530 441 aaKnown RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 APBA3O96018 575 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 GP1BAP07359 652 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 USP17L8P0C7I0 530 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 SPDYE6P0CI01 402 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 NCF1P14598 390 aaPredicted RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 MUC1P15941 1255 aaPredicted RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 NDUFB7P17568 137 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 PRKACGP22612 351 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 XKP51811 444 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 MAZP56270 477 aaKnown RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 SPDYE2Q495Y8 402 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 TSTD2Q5T7W7 516 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 AFTPHQ6ULP2 937 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 FAM198BQ6UWH4 519 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 HSDL2Q6YN16 418 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 CBWD2Q8IUF1 395 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 ZDHHC17Q8IUH5 632 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 SLC34A3Q8N130 599 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 NAGSQ8N159 534 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 DTWD1Q8N5C7 304 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 C9orf43Q8TAL5 461 aaPredicted RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 SCARB1Q8WTV0 552 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 POP5Q969H6 163 aaKnown RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 FCRL3Q96P31 734 aaPredicted RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 VRK1Q99986 396 aaPredicted RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 CRLF2Q9HC73 371 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 ABCB9Q9NP78 766 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 C11orf16Q9NQ32 467 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 EIF2B3Q9NR50 452 aaKnown RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 ZMIZ1Q9ULJ6 1067 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 A0A096LPI6 279 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 A0A1B0GW55 424 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 USP17L13C9JLJ4 530 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 USP17L17D6RBQ6 530 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 SGK494L7N484 410 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 LZTS3O60299 673 aaPredicted RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 PEX10O60683 326 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 HRGP04196 525 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 DUX4L2P0CJ85 424 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 DUX4L3P0CJ86 424 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 DUX4L4P0CJ87 422 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 DUX4L5P0CJ88 424 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 DUX4L6P0CJ89 424 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 DUX4L7P0CJ90 424 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 ZNF37AP17032 561 aaPredicted RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 C21orf33P30042 268 aaPredicted RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 PTGFRP43088 359 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 HSPA7P48741 367 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 MAN2A2P49641 1150 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 UBE2IP63279 158 aaKnown RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 ZNF33AQ06730 810 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 EIF4HQ15056 248 aaKnown RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 HECTD3Q5T447 861 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 FAM171A1Q5VUB5 890 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 C9orf131Q5VYM1 1079 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 CRTC1Q6UUV9 634 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 TMEM179BQ7Z7N9 219 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 ATCAYQ86WG3 371 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 SKA3Q8IX90 412 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 NANOGP1Q8N7R0 232 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 OR52E4Q8NGH9 312 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 PHOSPHO1Q8TCT1 267 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 CHURC1Q8WUH1 139 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 CRYGNQ8WXF5 182 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 BSNDQ8WZ55 320 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 DNASE1L2Q92874 299 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 SCMH1Q96GD3 660 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 MFSD14AQ96MC6 490 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 OR2M2Q96R28 347 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 KCNJ15Q99712 375 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 PI4K2AQ9BTU6 479 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 FN3KQ9H479 309 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 MAGIXQ9H6Y5 334 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 ACTR8Q9H981 624 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 C14orf105Q9NVL8 296 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 ASH2LQ9UBL3 628 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms