RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 CAPN1P07384 714 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 PCNAP12004 261 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 NEFHP12036 1026 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 CHN1P15882 459 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 BGNP21810 368 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 PIK3CBP42338 1070 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 PHEXP78562 749 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 HYAL2Q12891 473 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 MAP7Q14244 749 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 MUM1Q2TAK8 710 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 TBC1D25Q3MII6 688 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 FRG2Q64ET8 278 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 TMEM214Q6NUQ4 689 aaKnown RBP13.37□□□□□ -0.27
CTSS-202ENST00000448301 CUZD1Q86UP6 607 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 TRIM42Q8IWZ5 723 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 CDYL2Q8N8U2 506 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 PROKR1Q8TCW9 393 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 CLIP3Q96DZ5 547 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 C10orf90Q96M02 699 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 FRG2BQ96QU4 278 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
CTSS-202ENST00000448301 SLC7A5P2Q9GIP4 190 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 SLC6A16Q9GZN6 736 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 CUTCQ9NTM9 273 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 DKK4Q9UBT3 224 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 PPT2Q9UMR5 302 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 SNX6Q9UNH7 406 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 AKAP13Q12802 2813 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 URADA6NGE7 173 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 STMND1H3BQB6 276 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 FFAR3O14843 346 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 DSCR3O14972 297 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 GPR42O15529 346 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 KRT6AP02538 564 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 STATHP02808 62 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 KRT6BP04259 564 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 NTRK1P04629 796 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 CHRNGP07510 517 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 HMOX2P30519 316 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 ARRB2P32121 409 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 RORAP35398 523 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 KRT6CP48668 564 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 STXBP1P61764 594 aaKnown RBP13.36□□□□□ -0.27
CTSS-202ENST00000448301 IFT88Q13099 833 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 FAM53BQ14153 422 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 NDUFA9Q16795 377 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 ADPRMQ3LIE5 342 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 ARL13AQ5H913 290 aaPredicted RBP13.36□□□□□ -0.27
CTSS-202ENST00000448301 CES4AQ5XG92 561 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 TTC19Q6DKK2 380 aaPredicted RBP13.36□□□□□ -0.27
CTSS-202ENST00000448301 HOMEZQ8IX15 550 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 ARFGAP2Q8N6H7 521 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 SLC38A9Q8NBW4 561 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 KCT2Q8NC54 265 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 HUS1BQ8NHY5 278 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 METTL6Q8TCB7 284 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 CCT6BQ92526 530 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 MVB12AQ96EY5 273 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 MACROD1Q9BQ69 325 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 MS4A8Q9BY19 250 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 ELOVL6Q9H5J4 265 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 DMRT3Q9NQL9 472 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 TXLNGQ9NUQ3 528 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 INTS9Q9NV88 658 aaKnown RBP13.36□□□□□ -0.27
CTSS-202ENST00000448301 PSD3Q9NYI0 1048 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 SLC22A7Q9Y694 548 aa13.36□□□□□ -0.27
CTSS-202ENST00000448301 A0A1B0GX78 115 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 LRIT2A6NDA9 550 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 FOXE1O00358 373 aaPredicted RBP13.35□□□□□ -0.27
CTSS-202ENST00000448301 MED26O95402 600 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 FGF4P08620 206 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 UROSP10746 265 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 FOXA1P55317 472 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 ABCE1P61221 599 aaKnown RBP13.35□□□□□ -0.27
CTSS-202ENST00000448301 ZNF33BQ06732 778 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 STX3Q13277 289 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 DDX39BQ13838 428 aaKnown RBP13.35□□□□□ -0.27
CTSS-202ENST00000448301 ZNF385CQ66K41 422 aaPredicted RBP13.35□□□□□ -0.27
CTSS-202ENST00000448301 ATG14Q6ZNE5 492 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 TTLL10Q6ZVT0 673 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 DSELQ8IZU8 1212 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 AFAP1L2Q8N4X5 818 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 GAL3ST3Q96A11 431 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 CMTM7Q96FZ5 175 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 GBP5Q96PP8 586 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 KCNA7Q96RP8 456 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 DPH2Q9BQC3 489 aaPredicted RBP13.35□□□□□ -0.27
CTSS-202ENST00000448301 SHCBP1LQ9BZQ2 653 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 TNFRSF12AQ9NP84 129 aa13.35□□□□□ -0.27
CTSS-202ENST00000448301 DHCR7Q9UBM7 475 aaKnown RBP13.35□□□□□ -0.27
CTSS-202ENST00000448301 MAGEB17A8MXT2 336 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 MANBAO00462 879 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 KLF11O14901 512 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 AZIN1O14977 448 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 CRCPO75575 148 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 HSPA4LO95757 839 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 SMIM10L1P0DMW3 83 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 LIPCP11150 499 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 HNRNPH1P31943 449 aaKnown RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 SLC1A6P48664 564 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms