RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 PRTGQ2VWP7 1150 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 DDIASQ8IXT1 998 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 LRRC34Q8IZ02 419 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 CACTIN-AS1Q8N1I8 211 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 GALNT15Q8N3T1 639 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 ZNF655Q8N720 491 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 CAMKVQ8NCB2 501 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 ZCCHC10Q8TBK6 192 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 NT5CQ8TCD5 201 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 USP7Q93009 1102 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 PPP1R36Q96LQ0 422 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 F2RL3Q96RI0 385 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 MS4A8Q9BY19 250 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 OR51B5Q9H339 312 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 SERTAD3Q9UJW9 196 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 RARRES3Q9UL19 164 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 SATB2Q9UPW6 733 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 RUVBL1Q9Y265 456 aaKnown RBP17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 MRPS2Q9Y399 296 aaKnown RBP17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 TSC22D4Q9Y3Q8 395 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 CCDC88CQ9P219 2028 aa17.14■□□□□ 0.34
TRAPPC4-203ENST00000447216 DCHS1Q96JQ0 3298 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 B4E171 279 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 C4orf51C9J302 202 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 H3BMH7 237 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 SAP18O00422 153 aaKnown RBP17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 PLD2O14939 933 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 EDF1O60869 148 aaKnown RBP17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 MED26O95402 600 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 TIAF1O95411 115 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 CHEK2O96017 543 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 SLC35G6P0C7Q6 338 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 LINC00032P0C843 101 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 JMJD7P0C870 316 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 SERPINB1P30740 379 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 TSPAN7P41732 249 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 PHEXP78562 749 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 HMGCS1Q01581 520 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 RGS1Q08116 209 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 FOXC1Q12948 553 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 TCTE1Q5JU00 501 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 WDR36Q8NI36 951 aaKnown RBP17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 THOC1Q96FV9 657 aaKnown RBP17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 ACPTQ9BZG2 426 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 FGFR1OP2Q9NVK5 253 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 ADGRE2Q9UHX3 823 aa17.14■□□□□ 0.33
TRAPPC4-203ENST00000447216 SDK2Q58EX2 2172 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 A0A0G2JN53 185 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 FOXE1O00358 373 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 POLR1CO15160 346 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 B3GALT4O96024 378 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 SERPINA6P08185 405 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 FGF5P12034 268 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 GSTM2P28161 218 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 ID4P47928 161 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 BTKQ06187 659 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 PWP1Q13610 501 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 PWWP2BQ6NUJ5 590 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 WDR75Q8IWA0 830 aaKnown RBP17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 GPR135Q8IZ08 494 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 AFAP1L2Q8N4X5 818 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 DTWD1Q8N5C7 304 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 PIWIL2Q8TC59 973 aaKnown RBP17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 CMTM7Q96FZ5 175 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 SEC16BQ96JE7 1060 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 C3orf30Q96M34 536 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 ZNF317Q96PQ6 595 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 NLNQ9BYT8 704 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 NUF2Q9BZD4 464 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 SLC6A16Q9GZN6 736 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 FBXO8Q9NRD0 319 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 SLC12A4Q9UP95 1085 aa17.13■□□□□ 0.33
TRAPPC4-203ENST00000447216 LRIT2A6NDA9 550 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 ZSCAN9O15535 394 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 ZNF749O43361 778 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 ZNF888P0CJ79 500 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 LSP1P33241 339 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 RAB8AP61006 207 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 SF3A3Q12874 501 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 CSTF3Q12996 717 aaKnown RBP17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 EIF3IQ13347 325 aaKnown RBP17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 IL11RAQ14626 422 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 GRM7Q14831 915 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 KHDRBS2Q5VWX1 349 aaKnown RBP17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 MAVSQ7Z434 540 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 PPP1R3BQ86XI6 285 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 TMEM126BQ8IUX1 230 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 ARHGEF39Q8N4T4 335 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 TTC29Q8NA56 475 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 OR2T11Q8NH01 316 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 OR8K5Q8NH50 307 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 FAR2Q96K12 515 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 C10orf90Q96M02 699 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 SORBS1Q9BX66 1292 aaKnown RBP17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 GIMAP2Q9UG22 337 aa17.12■□□□□ 0.33
TRAPPC4-203ENST00000447216 HYKKA2RU49 373 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 FITM1A5D6W6 292 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 RTCAO00442 366 aaKnown RBP17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 TXNDC9O14530 226 aa17.11■□□□□ 0.33
TRAPPC4-203ENST00000447216 HDAC3O15379 428 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms