RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 STSP08842 583 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 PCYT1AP49585 367 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 RGS6P49758 472 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 SEPHS1P49903 392 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 PCDH1Q08174 1060 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 GPNMBQ14956 572 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 VEPH1Q14D04 833 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 MICAQ29983 383 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 C10orf62Q5T681 223 aaPredicted RBP18.38■□□□□ 0.53
SDCBP-204ENST00000447182 TPGS2Q68CL5 300 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 GRHL2Q6ISB3 625 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 RFLNAQ6ZTI6 216 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 NAGSQ8N159 534 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 FAM83FQ8NEG4 500 aaPredicted RBP18.38■□□□□ 0.53
SDCBP-204ENST00000447182 CDC26Q8NHZ8 85 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 SPPL2AQ8TCT8 520 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 BBS2Q9BXC9 721 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 RAD18Q9NS91 495 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 GPR83Q9NYM4 423 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 POU2F3Q9UKI9 436 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 CASP8AP2Q9UKL3 1982 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 RNASET2O00584 256 aaKnown RBP18.37■□□□□ 0.53
SDCBP-204ENST00000447182 MED26O95402 600 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 IDSP22304 550 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 AQP1P29972 269 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 HNF4AP41235 474 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 UGT2B15P54855 530 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 SNRPD1P62314 119 aaKnown RBP18.37■□□□□ 0.53
SDCBP-204ENST00000447182 LMAN2Q12907 356 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 DOC2AQ14183 400 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 ARMCX4Q5H9R4 360 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.37■□□□□ 0.53
SDCBP-204ENST00000447182 THOC6Q86W42 341 aaKnown RBP18.37■□□□□ 0.53
SDCBP-204ENST00000447182 STX19Q8N4C7 294 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 C9orf43Q8TAL5 461 aaPredicted RBP18.37■□□□□ 0.53
SDCBP-204ENST00000447182 YME1L1Q96TA2 773 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 VN1R3Q9BXE9 311 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 OR51E2Q9H255 320 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 SUV39H2Q9H5I1 410 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 RAPGEFL1Q9UHV5 662 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 MKLN1Q9UL63 735 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 CXorf51AA0A1B0GTR3 108 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 OLFM2O95897 454 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 PTHP01270 115 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 C1SP09871 688 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 SPINT3P49223 89 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 LRIT3Q3SXY7 679 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 IFI44LQ53G44 452 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 ZNF362Q5T0B9 420 aaPredicted RBP18.37■□□□□ 0.53
SDCBP-204ENST00000447182 C19orf48Q6RUI8 117 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 CLP1Q92989 425 aaKnown RBP18.37■□□□□ 0.53
SDCBP-204ENST00000447182 THSD1Q9NS62 852 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 RLIMQ9NVW2 624 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 IFT52Q9Y366 437 aa18.37■□□□□ 0.53
SDCBP-204ENST00000447182 LOC100506127A0A0U1RQW1 187 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 PNMA8CA0A1B0GUJ8 204 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 E7EQ34 232 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 ASNA1O43681 348 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 PCDH7O60245 1069 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 GSTM1P09488 218 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 ANXA4P09525 319 aaPredicted RBP18.36■□□□□ 0.53
SDCBP-204ENST00000447182 HLA-EP13747 358 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 IDH2P48735 452 aaKnown RBP18.36■□□□□ 0.53
SDCBP-204ENST00000447182 MVDP53602 400 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 ST3GAL4Q11206 333 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 MPP7Q5T2T1 576 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 RGMBQ6NW40 437 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 SERPINA13PQ6UXR4 307 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 DNAJB7Q7Z6W7 309 aaPredicted RBP18.36■□□□□ 0.53
SDCBP-204ENST00000447182 NLRP8Q86W28 1048 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 KLHDC8AQ8IYD2 350 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 METTL4Q8N3J2 472 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 C1orf52Q8N6N3 182 aaKnown RBP18.36■□□□□ 0.53
SDCBP-204ENST00000447182 GOT1L1Q8NHS2 421 aaPredicted RBP18.36■□□□□ 0.53
SDCBP-204ENST00000447182 CXorf40BQ96DE9 158 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 HOXD1Q9GZZ0 328 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 MOV10Q9HCE1 1003 aaKnown RBP18.36■□□□□ 0.53
SDCBP-204ENST00000447182 PRDM8Q9NQV8 689 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 QPCTLQ9NXS2 382 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 KLHL3Q9UH77 587 aa18.36■□□□□ 0.53
SDCBP-204ENST00000447182 DYRK3O43781 588 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 TNFRSF21O75509 655 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 ELNP15502 786 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 SPNP16150 400 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 GTF2E2P29084 291 aaKnown RBP18.35■□□□□ 0.53
SDCBP-204ENST00000447182 NUDT6P53370 316 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 DDX39BQ13838 428 aaKnown RBP18.35■□□□□ 0.53
SDCBP-204ENST00000447182 SF1Q15637 639 aaKnown RBP18.35■□□□□ 0.53
SDCBP-204ENST00000447182 DESI1Q6ICB0 168 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 ZNF367Q7RTV3 350 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 LGI4Q8N135 537 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 ARL14EPQ8N8R7 260 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-204ENST00000447182 FIBINQ8TAL6 211 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 ASZ1Q8WWH4 475 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 NIPSNAP1Q9BPW8 284 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 CENPOQ9BU64 300 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 GPATCH2Q9NW75 528 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 CLEC4EQ9ULY5 219 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 ZNF232Q9UNY5 417 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 PCDHGB6Q9Y5F9 930 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms