RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 SLC6A20Q9NP91 592 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 ZNF282Q9UDV7 671 aaPredicted RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 TBK1Q9UHD2 729 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 CDC14AQ9UNH5 594 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 KLK4Q9Y5K2 254 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 ANKRD12Q6UB98 2062 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 NOTCH2Q04721 2471 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 CCDC88CQ9P219 2028 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 CENPEQ02224 2701 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 ALG1L2C9J202 215 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 MASP2O00187 686 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 SASH3O75995 380 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 IPO13O94829 963 aaKnown RBP8.34□□□□□ -1.07
USP6NL-203ENST00000443016 HIST1H2AGP0C0S8 130 aaPredicted RBP8.34□□□□□ -1.07
USP6NL-203ENST00000443016 ERGP11308 486 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 HIST1H2ADP20671 130 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 SERPINB8P50452 374 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 ABATP80404 500 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 AIMP2Q13155 320 aaKnown RBP8.34□□□□□ -1.07
USP6NL-203ENST00000443016 FAM45BPQ6NSW5 357 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 FBXO42Q6P3S6 717 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 SNX32Q86XE0 403 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 CSNK1A1LQ8N752 337 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 FAM45AQ8TCE6 357 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 MIEF2Q96C03 454 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 HIST1H2AHQ96KK5 128 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 SPSB2Q99619 263 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 HIST1H2AJQ99878 128 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 H2AFJQ9BTM1 129 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 SLC26A1Q9H2B4 701 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 CCDC177Q9NQR7 707 aaPredicted RBP8.34□□□□□ -1.07
USP6NL-203ENST00000443016 C5AR2Q9P296 337 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 ANKMY1Q9P2S6 941 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 SLC17A6Q9P2U8 582 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 FBXL4Q9UKA2 621 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 MED16Q9Y2X0 877 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 PSAT1Q9Y617 370 aa8.34□□□□□ -1.07
USP6NL-203ENST00000443016 FAM95CA0A1B0GW59 222 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 A6NHS1 94 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 H7BY64 318 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 GFYI3L273 518 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 TXNDC9O14530 226 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 PIAS1O75925 651 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 EZRP15311 586 aaKnown RBP8.34□□□□□ -1.08
USP6NL-203ENST00000443016 FBLP22087 321 aaKnown RBP8.34□□□□□ -1.08
USP6NL-203ENST00000443016 UBAP2LQ14157 1087 aaKnown RBP8.34□□□□□ -1.08
USP6NL-203ENST00000443016 AGBL2Q5U5Z8 902 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 SLC6A19Q695T7 634 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 ZC3HC1Q86WB0 502 aaKnown RBP8.34□□□□□ -1.08
USP6NL-203ENST00000443016 SPNS2Q8IVW8 549 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 TMEM151BQ8IW70 566 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 FBXO15Q8NCQ5 510 aaPredicted RBP8.34□□□□□ -1.08
USP6NL-203ENST00000443016 STT3BQ8TCJ2 826 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 EEF1AKMT1Q8WVE0 214 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 PNPLA2Q96AD5 504 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 PRAP1Q96NZ9 151 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 GPR22Q99680 433 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 ILKAPQ9H0C8 392 aaPredicted RBP8.34□□□□□ -1.08
USP6NL-203ENST00000443016 SEMA3GQ9NS98 782 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 TRPC4Q9UBN4 977 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 PPT2Q9UMR5 302 aa8.34□□□□□ -1.08
USP6NL-203ENST00000443016 RUVBL1Q9Y265 456 aaKnown RBP8.34□□□□□ -1.08
USP6NL-203ENST00000443016 IGKV1-8A0A0C4DH67 115 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 TRIM49D1C9J1S8 452 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 EIF3FO00303 357 aaPredicted RBP8.33□□□□□ -1.08
USP6NL-203ENST00000443016 PRPF4O43172 522 aaKnown RBP eCLIP8.33□□□□□ -1.08
USP6NL-203ENST00000443016 AHSGP02765 367 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 ANXA5P08758 320 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 CXCR2P25025 360 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 GCAP28676 217 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 IMPA1P29218 277 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 KLC1Q07866 573 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 ESPL1Q14674 2120 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 TAF11Q15544 211 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 INPP5JQ15735 1006 aaPredicted RBP8.33□□□□□ -1.08
USP6NL-203ENST00000443016 HKDC1Q2TB90 917 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 VWA2Q5GFL6 755 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 PAQR3Q6TCH7 311 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 CYHR1Q6ZMK1 362 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 COX15Q7KZN9 410 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 CCDC91Q7Z6B0 441 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 PAQR7Q86WK9 346 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 PLD3Q8IV08 490 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 ZADH2Q8N4Q0 377 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 MMABQ96EY8 250 aaPredicted RBP8.33□□□□□ -1.08
USP6NL-203ENST00000443016 TSNARE1Q96NA8 513 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 DRC3Q9H069 523 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 ZNF552Q9H707 407 aaPredicted RBP8.33□□□□□ -1.08
USP6NL-203ENST00000443016 TMBIM4Q9HC24 238 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 CTNNAL1Q9UBT7 734 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 C3orf18Q9UK00 162 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 B3GNT3Q9Y2A9 372 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 HS3ST3B1Q9Y662 390 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 PCM1Q15154 2024 aa8.33□□□□□ -1.08
USP6NL-203ENST00000443016 ALOX12BO75342 701 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 FAM155BO75949 473 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 ONECUT2O95948 504 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 C8GP07360 202 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 ZGLP1P0C6A0 271 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 ACPPP15309 386 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms