RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PSMB5P28074 263 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 NHSL2Q5HYW2 709 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 DEPDC1Q5TB30 811 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 KHDRBS2Q5VWX1 349 aaKnown RBP11.29□□□□□ -0.6
SMAD3-202ENST00000439724 ENPP6Q6UWR7 440 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 KIAA1324Q6UXG2 1013 aaKnown RBP11.29□□□□□ -0.6
SMAD3-202ENST00000439724 TMEM92Q6UXU6 159 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 CARM1Q86X55 608 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 ZZZ3Q8IYH5 903 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 ST13P4Q8IZP2 240 aaPredicted RBP11.29□□□□□ -0.6
SMAD3-202ENST00000439724 EID3Q8N140 333 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 FAM86B1Q8N7N1 296 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 ANKRD53Q8N9V6 530 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 RPLP0P6Q8NHW5 317 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 FBXO30Q8TB52 745 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 PPCDCQ96CD2 204 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 SLC47A1Q96FL8 570 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 CNBD2Q96M20 576 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 MYOCQ99972 504 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 ANKRD60Q9BZ19 345 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 TPT1P8Q9HAU6 139 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 ZNF282Q9UDV7 671 aaPredicted RBP11.29□□□□□ -0.6
SMAD3-202ENST00000439724 MMP17Q9ULZ9 603 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 VPS4AQ9UN37 437 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 WBP11Q9Y2W2 641 aaKnown RBP11.29□□□□□ -0.6
SMAD3-202ENST00000439724 HEBP2Q9Y5Z4 205 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 POM121BA6NF01 834 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 LRRC72A6NJI9 287 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 SHISA7A6NL88 538 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 PDZK1P1A8MUH7 402 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 C10orf142B7Z368 130 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 H3BQ06 376 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-202ENST00000439724 PDLIM1O00151 329 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 UPK1AO00322 258 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 SAP18O00422 153 aaKnown RBP11.28□□□□□ -0.6
SMAD3-202ENST00000439724 DLGAP1O14490 977 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 KDM1AO60341 852 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 PRKD3O94806 890 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 CCNDBP1O95273 360 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 KCNK5O95279 499 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 APBB3O95704 486 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 MT-ND1P03886 318 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 KLK1P06870 262 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 FAM58BPP0C7Q3 252 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 HNRNPA2B1P22626 353 aaKnown RBP11.28□□□□□ -0.6
SMAD3-202ENST00000439724 TPP2P29144 1249 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-202ENST00000439724 ACSL1P33121 698 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 GSTM5P46439 218 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 TPMTP51580 245 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 CSNK1G2P78368 415 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 PRDX1Q06830 199 aaKnown RBP11.28□□□□□ -0.6
SMAD3-202ENST00000439724 CCINQ13939 588 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 RPE65Q16518 533 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 NKG7Q16617 165 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 VMACQ2NL98 169 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 IER5LQ5T953 404 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 WASH2PQ6VEQ5 465 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 OR52E1Q8NGJ3 308 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 OR2A1Q8NGT9 310 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 NETO1Q8TDF5 533 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 ZFP90Q8TF47 636 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 TFAP2CQ92754 450 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 WDR92Q96MX6 357 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 ZNF717Q9BY31 904 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-202ENST00000439724 CHST8Q9H2A9 424 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 KIR3DX1Q9H7L2 352 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 ZNF696Q9H7X3 374 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 NTN4Q9HB63 628 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 AASDHPPTQ9NRN7 309 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 SH3BP4Q9P0V3 963 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 DNAJB9Q9UBS3 223 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 ICKQ9UPZ9 632 aa11.28□□□□□ -0.6
SMAD3-202ENST00000439724 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-202ENST00000439724 HEATR5BQ9P2D3 2071 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 TMEM265A0A087WTH1 108 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 RNF103-CHMP3A0A140T963 221 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 TCRBV21S2A2A0A5A6 115 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 TRBC2A0A5B9 178 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 H7BY64 318 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 PLPP1O14494 284 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 EI24O14681 340 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 TNFRSF10CO14798 259 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 PRICKLE3O43900 615 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-202ENST00000439724 TBX19O60806 448 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 GPR37L1O60883 481 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 TNFAIP8O95379 198 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 SERPINA1P01009 418 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 GBAP04062 536 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 LINGO3P0C6S8 592 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 GABRG2P18507 467 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 BSGP35613 385 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 CLDN2P57739 230 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 TAS2R50P59544 299 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 ABATP80404 500 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 MYBPC1Q00872 1141 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 C2orf80Q0P641 193 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 GAB1Q13480 694 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 SMAD4Q13485 552 aaKnown RBP11.27□□□□□ -0.61
SMAD3-202ENST00000439724 VEZF1Q14119 521 aa11.27□□□□□ -0.61
SMAD3-202ENST00000439724 KRT33BQ14525 404 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms