RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 Q6ZPB1 254 aaPredicted RBP8.27□□□□□ -1.09
HPS4-206ENST00000439453 TMEM132CQ8N3T6 1108 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 SLC7A6Q92536 515 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 INPP5KQ9BT40 448 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 KCNH6Q9H252 994 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 ABCC13Q9NSE7 274 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 NLE1Q9NVX2 485 aaPredicted RBP8.27□□□□□ -1.09
HPS4-206ENST00000439453 SPASTQ9UBP0 616 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 CFL2Q9Y281 166 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 A0A0G2JMP0 313 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 TFECO14948 347 aaPredicted RBP8.27□□□□□ -1.09
HPS4-206ENST00000439453 CYP7B1O75881 506 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 OTCP00480 354 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 PTHP01270 115 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 HSMCR30P0CW71 290 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 HTR2BP41595 481 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 RPS5P46782 204 aaKnown RBP8.27□□□□□ -1.09
HPS4-206ENST00000439453 CDKN1CP49918 316 aaPredicted RBP8.27□□□□□ -1.09
HPS4-206ENST00000439453 NTHL1P78549 312 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 DAB2P98082 770 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 HMGCS1Q01581 520 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 TJAP1Q5JTD0 557 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 LRIF1Q5T3J3 769 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 MLIPQ5VWP3 458 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 AFTPHQ6ULP2 937 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 SUSD1Q6UWL2 747 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 BPHLQ86WA6 291 aaPredicted RBP8.27□□□□□ -1.09
HPS4-206ENST00000439453 ANKK1Q8NFD2 765 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 DNAJB8Q8NHS0 232 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 CD200R1Q8TD46 325 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 COL21A1Q96P44 957 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 KCNC2Q96PR1 638 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 FYTTD1Q96QD9 318 aaKnown RBP8.27□□□□□ -1.09
HPS4-206ENST00000439453 CITED4Q96RK1 184 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 IPPKQ9H8X2 491 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 REEP1Q9H902 201 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 THUMPD1Q9NXG2 353 aaKnown RBP8.27□□□□□ -1.09
HPS4-206ENST00000439453 STMN3Q9NZ72 180 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 PRELID1Q9Y255 219 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 YIPF1Q9Y548 306 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 KLK4Q9Y5K2 254 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 FFAR3O14843 346 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 CCL16O15467 120 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 GPR42O15529 346 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 GNPDA1P46926 289 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 NUDT6P53370 316 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 EPHA5P54756 1037 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 SMU1Q2TAY7 513 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 GPAT3Q53EU6 434 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 ZNF551Q7Z340 670 aaPredicted RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 VTCN1Q7Z7D3 282 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 TMEM150AQ86TG1 271 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 IQCF2Q8IXL9 164 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 COL25A1Q9BXS0 654 aaPredicted RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 TNKS2Q9H2K2 1166 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 SMURF1Q9HCE7 757 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 SERHLQ9NQF3 203 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 GPR83Q9NYM4 423 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 NUFIP1Q9UHK0 495 aaKnown RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 MUTYHQ9UIF7 546 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 MAFFQ9ULX9 164 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 PCDHB5Q9Y5E4 795 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 TNPO3Q9Y5L0 923 aaKnown RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 A0A075B6Q4 140 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 LINC00854A0A1B0GVQ3 168 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 SLC28A1O00337 649 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 OR1I1O60431 355 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 SEMG1P04279 462 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 ZNF140P52738 457 aaPredicted RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 ARPP19P56211 112 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 CYP4F2P78329 520 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 DUSP4Q13115 394 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 NFE2Q16621 373 aaPredicted RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 ALFQ53S48 1182 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 INO80DQ53TQ3 878 aaPredicted RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 CTSL3PQ5NE16 218 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 GALNT10Q86SR1 603 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 ANKRD46Q86W74 232 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 ZSWIM9Q86XI8 627 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 STX19Q8N4C7 294 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 OR4K2Q8NGD2 314 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 TTC9Q92623 222 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 GABARAPL3Q9BY60 117 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 MMP28Q9H239 520 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 ZNF334Q9HCZ1 680 aaPredicted RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 SARS2Q9NP81 518 aaKnown RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 ZC4H2Q9NQZ6 224 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 DYRK4Q9NR20 520 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 FARSBQ9NSD9 589 aaKnown RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 TSR3Q9UJK0 312 aaKnown RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 ZNF490Q9ULM2 529 aaPredicted RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 DOCK4Q8N1I0 1966 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 A0A0X1KG70 313 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 EPOP01588 193 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 HNRNPA1P09651 372 aaKnown RBP eCLIP8.26□□□□□ -1.09
HPS4-206ENST00000439453 RHOQP17081 205 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 PCSK1P29120 753 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 PRIM2P49643 509 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 OLR1P78380 273 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 FCHO2Q0JRZ9 810 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms