RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 PRSS36Q5K4E3 855 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 BRAT1Q6PJG6 821 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 GDPD4Q6W3E5 623 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 CCDC81Q6ZN84 652 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 USP43Q70EL4 1123 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 AHSA2Q719I0 299 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 PAGE2Q7Z2X7 111 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 DDX53Q86TM3 631 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 NAGSQ8N159 534 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 C11orf65Q8NCR3 313 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 TTC16Q8NEE8 873 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 BHMTQ93088 406 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF689Q96CS4 500 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ZHX1-C8orf76Q96EF9 292 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 VPS35Q96QK1 796 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 CFHR5Q9BXR6 569 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ABCG8Q9H221 673 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 DCSTAMPQ9H295 470 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 RASSF1Q9NS23 344 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 RAD18Q9NS91 495 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF226Q9NYT6 803 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 SPASTQ9UBP0 616 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 POFUT2Q9Y2G5 429 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 SH3BP1Q9Y3L3 701 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 PCDHGA4Q9Y5G9 962 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 PCDHGA3Q9Y5H0 932 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 MN1Q10571 1320 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 HELZP42694 1942 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 AGAP5A6NIR3 686 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 FOXE1O00358 373 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ALDH4A1P30038 563 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 TIA1P31483 386 aaKnown RBP eCLIP7.57□□□□□ -1.26e-7■■■■■ 29.1
LRCH3-204ENST00000428136 VIPR1P32241 457 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 LSM3P62310 102 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 PPIGQ13427 754 aaKnown RBP eCLIP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 DGCR6Q14129 220 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF404Q494X3 552 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 CRB2Q5IJ48 1285 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 PERM1Q5SV97 790 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 HENMT1Q5T8I9 393 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 AGTRAPQ6RW13 159 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF605Q86T29 641 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 LYSMD2Q8IV50 215 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 CCDC103Q8IW40 242 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 OR7G3Q8NG95 312 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ELMO1Q92556 727 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 TPD52L3Q96J77 140 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 MTERF1Q99551 399 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 FEVQ99581 238 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 BBS2Q9BXC9 721 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 FAM83DQ9H4H8 585 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 PCDH12Q9NPG4 1184 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 KRT87PA6NCN2 255 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 PRAMEF25A6NGN4 478 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 TNFRSF11BO00300 401 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 DSCR3O14972 297 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 KLHL18O94889 574 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 ANXA4P09525 319 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-204ENST00000428136 CYP2A6P11509 494 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-204ENST00000428136 CTSKP43235 329 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 IL1RL1Q01638 556 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 PRKCDQ05655 676 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.56□□□□□ -1.2
LRCH3-204ENST00000428136 ASTLQ6HA08 431 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-204ENST00000428136 SLCO4C1Q6ZQN7 724 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 HSD11B1LQ7Z5J1 315 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 KIAA0907Q7Z7F0 614 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-204ENST00000428136 PLD3Q8IV08 490 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 C1orf52Q8N6N3 182 aaKnown RBP7.56□□□□□ -1.2
LRCH3-204ENST00000428136 OR52N2Q8NGI0 321 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 MCFD2Q8NI22 146 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 SKA2Q8WVK7 121 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-204ENST00000428136 EFHD2Q96C19 240 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-204ENST00000428136 CRELD1Q96HD1 420 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 RC3H2Q9HBD1 1191 aaKnown RBP7.56□□□□□ -1.2
LRCH3-204ENST00000428136 SGK2Q9HBY8 427 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 C1GALT1Q9NS00 363 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 TSC22D4Q9Y3Q8 395 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 KLK4Q9Y5K2 254 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 UPK3BL1B0FP48 263 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 UPK3BL2E5RIL1 263 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 LEFTY2O00292 366 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 AIREO43918 545 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 PCDH7O60245 1069 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 AOC2O75106 756 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 VIPP01282 170 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 HLA-EP13747 358 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF8P17098 575 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-204ENST00000428136 GABRR2P28476 465 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 IMPA1P29218 277 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 PCBP3P57721 371 aaKnown RBP7.56□□□□□ -1.2
LRCH3-204ENST00000428136 CYP4F8P98187 520 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF45Q02386 682 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 CD300CQ08708 224 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 TIGD6Q17RP2 521 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 IFI44LQ53G44 452 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 TECPR1Q7Z6L1 1165 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 ARMC8Q8IUR7 673 aa7.56□□□□□ -1.2
LRCH3-204ENST00000428136 LAS2Q8IYD9 372 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms