RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 AURKCQ9UQB9 309 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 ERVK-11Q9UQG0 969 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 MRPS17Q9Y2R5 130 aaKnown RBP25.39■■□□□ 1.65
LDB1-202ENST00000425280 DTNAQ9Y4J8 743 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 DGKBQ9Y6T7 804 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 LCMT2O60294 686 aaKnown RBP25.38■■□□□ 1.65
LDB1-202ENST00000425280 TIPRLO75663 272 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 GPIP06744 558 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 CALHM3Q86XJ0 350 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 PLD3Q8IV08 490 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 FAM160A2Q8N612 972 aaPredicted RBP25.38■■□□□ 1.65
LDB1-202ENST00000425280 ADCY4Q8NFM4 1077 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 CXorf40BQ96DE9 158 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 F2RL3Q96RI0 385 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 TPSD1Q9BZJ3 242 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 SLC6A20Q9NP91 592 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 PLPP1O14494 284 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 SEMA3DO95025 777 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 GZMMP51124 257 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 AQP4P55087 323 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 TBCELQ5QJ74 424 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 HMBOX1Q6NT76 420 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 TICAM1Q8IUC6 712 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 C10orf111Q8N326 155 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 LCN9Q8WX39 176 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 SNX19Q92543 992 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 FOXQ1Q9C009 403 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 AHSPQ9NZD4 102 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 LRCH1Q9Y2L9 728 aa25.38■■□□□ 1.65
LDB1-202ENST00000425280 TRBV23OR9-2A0A075B6M9 112 aa25.37■■□□□ 1.65
LDB1-202ENST00000425280 F3P13726 295 aa25.37■■□□□ 1.65
LDB1-202ENST00000425280 EFNA1P20827 205 aaPredicted RBP25.37■■□□□ 1.65
LDB1-202ENST00000425280 SLC19A1P41440 591 aa25.37■■□□□ 1.65
LDB1-202ENST00000425280 ZNF385BQ569K4 471 aa25.37■■□□□ 1.65
LDB1-202ENST00000425280 FAM71E1Q6IPT2 247 aa25.37■■□□□ 1.65
LDB1-202ENST00000425280 OR2L3Q8NG85 312 aa25.37■■□□□ 1.65
LDB1-202ENST00000425280 NSMCE2Q96MF7 247 aa25.37■■□□□ 1.65
LDB1-202ENST00000425280 TBCDQ9BTW9 1192 aa25.37■■□□□ 1.65
LDB1-202ENST00000425280 ZNF717Q9BY31 904 aaPredicted RBP25.37■■□□□ 1.65
LDB1-202ENST00000425280 SEMA6AQ9H2E6 1030 aa25.37■■□□□ 1.65
LDB1-202ENST00000425280 BTNL2Q9UIR0 455 aa25.37■■□□□ 1.65
LDB1-202ENST00000425280 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.37■■□□□ 1.65
LDB1-202ENST00000425280 FANCMQ8IYD8 2048 aa25.37■■□□□ 1.65
LDB1-202ENST00000425280 FAM170BA6NMN3 283 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 CPSF4O95639 269 aaKnown RBP25.36■■□□□ 1.65
LDB1-202ENST00000425280 TNFP01375 233 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 IL10P22301 178 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 TPP2P29144 1249 aaPredicted RBP25.36■■□□□ 1.65
LDB1-202ENST00000425280 SHMT2P34897 504 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 TAS2R50P59544 299 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 ABATP80404 500 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 MC1RQ01726 317 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 AMIGO1Q86WK6 493 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 TNIP2Q8NFZ5 429 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 OR4E2Q8NGC2 313 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 SH3BP4Q9P0V3 963 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 TRIOO75962 3097 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 IGHV1OR15-9A0A0B4J2B8 117 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 ELOVL7A1L3X0 281 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 ZNF217O75362 1048 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 UMPSP11172 480 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 STARD6P59095 220 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 C2orf80Q0P641 193 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 PDE7AQ13946 482 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 ANXA8L1Q5VT79 327 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 ERMP1Q7Z2K6 904 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 FBXL6Q8N531 539 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 CATSPER1Q8NEC5 780 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 GUCD1Q96NT3 240 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 ORAI3Q9BRQ5 295 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 TCEAL2Q9H3H9 227 aaPredicted RBP25.36■■□□□ 1.65
LDB1-202ENST00000425280 OR6C2Q9NZP2 312 aa25.36■■□□□ 1.65
LDB1-202ENST00000425280 A0A1W2PPC4 97 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 TRBC2A0A5B9 178 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 FAM220BPB1ANY3 271 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 HNRNPRO43390 633 aaKnown RBP25.35■■□□□ 1.65
LDB1-202ENST00000425280 C1QCP02747 245 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 CHRM5P08912 532 aaPredicted RBP25.35■■□□□ 1.65
LDB1-202ENST00000425280 FURINP09958 794 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 BSGP35613 385 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 ILF3Q12906 894 aaKnown RBP eCLIP25.35■■□□□ 1.65
LDB1-202ENST00000425280 EIF2B5Q13144 721 aaKnown RBP25.35■■□□□ 1.65
LDB1-202ENST00000425280 SLC14A1Q13336 389 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 ZNF621Q6ZSS3 439 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 AMIGO2Q86SJ2 522 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 PPWD1Q96BP3 646 aaKnown RBP25.35■■□□□ 1.65
LDB1-202ENST00000425280 FAM120BQ96EK7 910 aaKnown RBP25.35■■□□□ 1.65
LDB1-202ENST00000425280 BHLHE41Q9C0J9 482 aaPredicted RBP25.35■■□□□ 1.65
LDB1-202ENST00000425280 GPR27Q9NS67 375 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 TMEM184CQ9NVA4 438 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 ANAPC2Q9UJX6 822 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 SLCO1B1Q9Y6L6 691 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 RTCAO00442 366 aaKnown RBP25.35■■□□□ 1.65
LDB1-202ENST00000425280 GSTA4O15217 222 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 ANXA6P08133 673 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 THEGLP0DJG4 465 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 POLE2P56282 527 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 R3HCC1LQ7Z5L2 792 aaKnown RBP25.35■■□□□ 1.65
LDB1-202ENST00000425280 MICU2Q8IYU8 434 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 TRPV3Q8NET8 790 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms