RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 FAM219BQ5XKK7 198 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 CLEC6AQ6EIG7 209 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 IGF2-ASQ6U949 168 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 NT5CQ8TCD5 201 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 ZNF473Q8WTR7 871 aaKnown RBP16.72■□□□□ 0.27
LINC00271-201ENST00000421378 SELENOMQ8WWX9 145 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 ZNF75CPQ92670 426 aaPredicted RBP16.72■□□□□ 0.27
LINC00271-201ENST00000421378 NDC1Q9BTX1 674 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 ULBP3Q9BZM4 244 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 B3GNT4Q9C0J1 378 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 ZNF395Q9H8N7 513 aaPredicted RBP16.72■□□□□ 0.27
LINC00271-201ENST00000421378 DMRT3Q9NQL9 472 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 THAP1Q9NVV9 213 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 SRPK3Q9UPE1 567 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 MSRB2Q9Y3D2 182 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 SPTBP11277 2137 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 HYKKA2RU49 373 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 TRABD2BA6NFA1 517 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 MAGEB17A8MXT2 336 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 AZIN1O14977 448 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 NVLO15381 856 aaKnown RBP16.71■□□□□ 0.27
LINC00271-201ENST00000421378 CPNE3O75131 537 aaKnown RBP16.71■□□□□ 0.27
LINC00271-201ENST00000421378 SNNO75324 88 aaPredicted RBP16.71■□□□□ 0.27
LINC00271-201ENST00000421378 ULK1O75385 1050 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 DXOO77932 396 aaKnown RBP16.71■□□□□ 0.27
LINC00271-201ENST00000421378 FAM214AQ32MH5 1076 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 YOD1Q5VVQ6 348 aaPredicted RBP16.71■□□□□ 0.27
LINC00271-201ENST00000421378 TMEM214Q6NUQ4 689 aaKnown RBP16.71■□□□□ 0.27
LINC00271-201ENST00000421378 KCT2Q8NC54 265 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 MTFMTQ96DP5 389 aaKnown RBP16.71■□□□□ 0.27
LINC00271-201ENST00000421378 SORT1Q99523 831 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 SLC6A16Q9GZN6 736 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 ILKAPQ9H0C8 392 aaPredicted RBP16.71■□□□□ 0.27
LINC00271-201ENST00000421378 ACTR5Q9H9F9 607 aaPredicted RBP16.71■□□□□ 0.27
LINC00271-201ENST00000421378 FARSBQ9NSD9 589 aaKnown RBP16.71■□□□□ 0.27
LINC00271-201ENST00000421378 FOXJ2Q9P0K8 574 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 FIS1Q9Y3D6 152 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 AK5Q9Y6K8 562 aa16.71■□□□□ 0.27
LINC00271-201ENST00000421378 FREM2Q5SZK8 3169 aa16.71■□□□□ 0.26
LINC00271-201ENST00000421378 CACNA1AO00555 2505 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 LRIT2A6NDA9 550 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 URADA6NGE7 173 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 TMEM233B4DJY2 109 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 FOXE1O00358 373 aaPredicted RBP16.7■□□□□ 0.26
LINC00271-201ENST00000421378 MANBAO00462 879 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 FGF4P08620 206 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 ARSFP54793 590 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 EMP3P54852 163 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 STXBP1P61764 594 aaKnown RBP16.7■□□□□ 0.26
LINC00271-201ENST00000421378 HYAL2Q12891 473 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 COL9A2Q14055 689 aaPredicted RBP16.7■□□□□ 0.26
LINC00271-201ENST00000421378 MUM1Q2TAK8 710 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 SGO1Q5FBB7 561 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 GARNL3Q5VVW2 1013 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 KANK2Q63ZY3 851 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 HOMEZQ8IX15 550 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 CLYBLQ8N0X4 340 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 RNF175Q8N4F7 328 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 ZNF781Q8N8C0 355 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 ZCCHC10Q8TBK6 192 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 CKAP2Q8WWK9 683 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 RNF31Q96EP0 1072 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 CMTM7Q96FZ5 175 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 C10orf90Q96M02 699 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 MAGEB18Q96M61 343 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 HBEGFQ99075 208 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 MS4A8Q9BY19 250 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 REXO4Q9GZR2 422 aaKnown RBP16.7■□□□□ 0.26
LINC00271-201ENST00000421378 ASCL3Q9NQ33 180 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 CUTCQ9NTM9 273 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 ZDHHC2Q9UIJ5 367 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 RAP2CQ9Y3L5 183 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 TRAF6Q9Y4K3 522 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 PCDHGA7Q9Y5G6 932 aa16.7■□□□□ 0.26
LINC00271-201ENST00000421378 CDRT15L2A8MXV6 281 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 BRINP1O60477 761 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 STK17BO94768 372 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 KIAA0754O94854 1291 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 TBX6O95947 436 aaPredicted RBP16.69■□□□□ 0.26
LINC00271-201ENST00000421378 CHEK2O96017 543 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 TGFB1P01137 390 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 PDYNP01213 254 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 NTRK1P04629 796 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 HBQ1P09105 142 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 ZNF28P17035 718 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 SERPINB3P29508 390 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 SLC5A2P31639 672 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 HNRNPH1P31943 449 aaKnown RBP16.69■□□□□ 0.26
LINC00271-201ENST00000421378 GCGRP47871 477 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 RPS13P62277 151 aaKnown RBP16.69■□□□□ 0.26
LINC00271-201ENST00000421378 ZNF33BQ06732 778 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 NDUFA9Q16795 377 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 RHBDD2Q6NTF9 364 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 TTLL10Q6ZVT0 673 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 ABHD13Q7L211 337 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 KIRREL3Q8IZU9 778 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 ARHGEF39Q8N4T4 335 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 CLIP3Q96DZ5 547 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 BRF2Q9HAW0 419 aa16.69■□□□□ 0.26
LINC00271-201ENST00000421378 THSD1Q9NS62 852 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms