RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 SLC8B1Q6J4K2 584 aa15.3■□□□□ 0.04
TRIM13-204ENST00000420995 ZNF605Q86T29 641 aa15.3■□□□□ 0.04
TRIM13-204ENST00000420995 LGI4Q8N135 537 aa15.3■□□□□ 0.04
TRIM13-204ENST00000420995 C1orf52Q8N6N3 182 aaKnown RBP15.3■□□□□ 0.04
TRIM13-204ENST00000420995 GPR156Q8NFN8 814 aa15.3■□□□□ 0.04
TRIM13-204ENST00000420995 FOXJ1Q92949 421 aa15.3■□□□□ 0.04
TRIM13-204ENST00000420995 OR5M11Q96RB7 305 aa15.3■□□□□ 0.04
TRIM13-204ENST00000420995 CCDC59Q9P031 241 aaKnown RBP15.3■□□□□ 0.04
TRIM13-204ENST00000420995 STOML2Q9UJZ1 356 aa15.3■□□□□ 0.04
TRIM13-204ENST00000420995 TMPRSS11EQ9UL52 423 aa15.3■□□□□ 0.04
TRIM13-204ENST00000420995 IFT52Q9Y366 437 aa15.3■□□□□ 0.04
TRIM13-204ENST00000420995 PRAMEF25A6NGN4 478 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 J3KTA2 159 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 PRMT3O60678 531 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 DPM1O60762 260 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 SOCS5O75159 536 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 GABRB1P18505 474 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 CRATP43155 626 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 STK19P49842 368 aaPredicted RBP15.29■□□□□ 0.04
TRIM13-204ENST00000420995 DGKEP52429 567 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 ACLYP53396 1101 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 UGT2B15P54855 530 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 CPTPQ5TA50 214 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 MLIPQ5VWP3 458 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 DBF4BQ8NFT6 615 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 WDR20Q8TBZ3 569 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 ADAMTS19Q8TE59 1207 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 COL21A1Q96P44 957 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 MS4A12Q9NXJ0 267 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 A3GALT2U3KPV4 340 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 A6NL46 340 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 ADAMDEC1O15204 470 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 MED26O95402 600 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 ETFAP13804 333 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 ZNF24P17028 368 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 SERPINA4P29622 427 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 LIMK1P53667 647 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 SELENOWP63302 87 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 ELAVL2Q12926 359 aaKnown RBP15.29■□□□□ 0.04
TRIM13-204ENST00000420995 TTC23LQ6PF05 361 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 NPAS3Q8IXF0 933 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 C11orf65Q8NCR3 313 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 VOPP1Q96AW1 172 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 TP63Q9H3D4 680 aaPredicted RBP15.29■□□□□ 0.04
TRIM13-204ENST00000420995 MARCH7Q9H992 704 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 GPATCH2Q9NW75 528 aa15.29■□□□□ 0.04
TRIM13-204ENST00000420995 CFAP20Q9Y6A4 193 aaKnown RBP15.29■□□□□ 0.04
TRIM13-204ENST00000420995 GREM1O60565 184 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 CYP2A7P20853 494 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 PCGF2P35227 344 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 COPZ1P61923 177 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 RAE1P78406 368 aaKnown RBP15.28■□□□□ 0.04
TRIM13-204ENST00000420995 CSTF3Q12996 717 aaKnown RBP15.28■□□□□ 0.04
TRIM13-204ENST00000420995 DOC2AQ14183 400 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 PCSK9Q8NBP7 692 aaKnown RBP15.28■□□□□ 0.04
TRIM13-204ENST00000420995 B3GNT7Q8NFL0 401 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 OR4K1Q8NGD4 311 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 ZNF486Q96H40 463 aaPredicted RBP15.28■□□□□ 0.04
TRIM13-204ENST00000420995 KCNS3Q9BQ31 491 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 SPATA6Q9NWH7 488 aaPredicted RBP15.28■□□□□ 0.04
TRIM13-204ENST00000420995 IMPAD1Q9NX62 359 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 ERVK13-1Q9NX77 482 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 EHD3Q9NZN3 535 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 SH3BP4Q9P0V3 963 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 DUSP12Q9UNI6 340 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 RUVBL1Q9Y265 456 aaKnown RBP15.28■□□□□ 0.04
TRIM13-204ENST00000420995 TMEM88BA6NKF7 163 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 TBKBP1A7MCY6 615 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 GFYI3L273 518 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 CTDSP2O14595 271 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 KIAA0513O60268 411 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 ANXA4P09525 319 aaPredicted RBP15.28■□□□□ 0.04
TRIM13-204ENST00000420995 CTSOP43234 321 aaPredicted RBP15.28■□□□□ 0.04
TRIM13-204ENST00000420995 MED22Q15528 200 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 TPRG1Q6ZUI0 275 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 ARL14EPQ8N8R7 260 aaPredicted RBP15.28■□□□□ 0.04
TRIM13-204ENST00000420995 OR4A15Q8NGL6 344 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 OR4C15Q8NGM1 316 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 GTPBP3Q969Y2 492 aaKnown RBP15.28■□□□□ 0.04
TRIM13-204ENST00000420995 C11orf24Q96F05 449 aaPredicted RBP15.28■□□□□ 0.04
TRIM13-204ENST00000420995 MED8Q96G25 268 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 TCF25Q9BQ70 676 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 NUAK2Q9H093 628 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 NEK6Q9HC98 313 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 FBXL12Q9NXK8 326 aa15.28■□□□□ 0.04
TRIM13-204ENST00000420995 IGSF6O95976 241 aa15.27■□□□□ 0.04
TRIM13-204ENST00000420995 PXNP49023 591 aaPredicted RBP15.27■□□□□ 0.04
TRIM13-204ENST00000420995 TSTQ16762 297 aaKnown RBP15.27■□□□□ 0.04
TRIM13-204ENST00000420995 FBXO43Q4G163 708 aa15.27■□□□□ 0.04
TRIM13-204ENST00000420995 SPANXN2Q5MJ10 180 aa15.27■□□□□ 0.04
TRIM13-204ENST00000420995 RSBN1Q5VWQ0 802 aaPredicted RBP15.27■□□□□ 0.04
TRIM13-204ENST00000420995 TMEM150AQ86TG1 271 aa15.27■□□□□ 0.04
TRIM13-204ENST00000420995 HOMEZQ8IX15 550 aa15.27■□□□□ 0.04
TRIM13-204ENST00000420995 RAD9AQ99638 391 aa15.27■□□□□ 0.04
TRIM13-204ENST00000420995 SDHCQ99643 169 aaPredicted RBP15.27■□□□□ 0.04
TRIM13-204ENST00000420995 TMEM121BQ9BXQ6 578 aaPredicted RBP15.27■□□□□ 0.04
TRIM13-204ENST00000420995 TPK1Q9H3S4 243 aa15.27■□□□□ 0.04
TRIM13-204ENST00000420995 KLHL42Q9P2K6 505 aa15.27■□□□□ 0.04
TRIM13-204ENST00000420995 ACSL6Q9UKU0 697 aa15.27■□□□□ 0.04
TRIM13-204ENST00000420995 POFUT2Q9Y2G5 429 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms