RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 STRA8Q7Z7C7 330 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 ANKRD53Q8N9V6 530 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 ST6GALNAC3Q8NDV1 305 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 OR5T3Q8NGG3 340 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 PRR7Q8TB68 274 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 GRHL3Q8TE85 626 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 ANKRD7Q92527 254 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 HAS2Q92819 552 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 HIST1H2AHQ96KK5 128 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 CNDP1Q96KN2 507 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 TAAR6Q96RI8 345 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 HIST1H2AJQ99878 128 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 H2AFJQ9BTM1 129 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 FAM129AQ9BZQ8 928 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 RHOJQ9H4E5 214 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 PLA2G3Q9NZ20 509 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 ZFATQ9P243 1243 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 RNF14Q9UBS8 474 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 NAALAD2Q9Y3Q0 740 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 ZNF860A6NHJ4 632 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 RAD51CO43502 376 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 OR1F1O43749 312 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 GALR3O60755 368 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-206ENST00000420121 SEC24DO94855 1032 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-206ENST00000420121 SLC35G6P0C7Q6 338 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 SMIM10L1P0DMW3 83 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 SSTR1P30872 391 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 PAFAH1B1P43034 410 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 CDKL1Q00532 357 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 REEP5Q00765 189 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 CDC16Q13042 620 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 PWP1Q13610 501 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 C18orf21Q32NC0 220 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-206ENST00000420121 CPEB2Q7Z5Q1 589 aaKnown RBP10.41□□□□□ -0.74
SSBP3-206ENST00000420121 ANKRD37Q7Z713 158 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 THOC6Q86W42 341 aaKnown RBP10.41□□□□□ -0.74
SSBP3-206ENST00000420121 KLHDC8AQ8IYD2 350 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 ZBED8Q8IZ13 594 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 C17orf53Q8N3J3 647 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-206ENST00000420121 SPATA4Q8NEY3 305 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 NT5CQ8TCD5 201 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 FAR1Q8WVX9 515 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 SLC5A11Q8WWX8 675 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 ATL1Q8WXF7 558 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 SMIM10Q96HG1 83 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 VPS39Q96JC1 886 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 TSNARE1Q96NA8 513 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 NPAS2Q99743 824 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 SLX1AQ9BQ83 275 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 ERP44Q9BS26 406 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 TUBB6Q9BUF5 446 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 RBCK1Q9BYM8 510 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 TRIM54Q9BYV2 358 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 ANKHQ9HCJ1 492 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 LRRC4CQ9HCJ2 640 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 WHRNQ9P202 907 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 PLEKHB1Q9UF11 243 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-206ENST00000420121 MTO1Q9Y2Z2 717 aaKnown RBP10.41□□□□□ -0.74
SSBP3-206ENST00000420121 OARD1Q9Y530 152 aa10.41□□□□□ -0.74
SSBP3-206ENST00000420121 FAM187AA6NFU0 413 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 NDUFS4O43181 175 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 WDPCPO95876 746 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 TBX6O95947 436 aaPredicted RBP10.4□□□□□ -0.74
SSBP3-206ENST00000420121 F10P00742 488 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 ALOX12P18054 663 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 SAT1P21673 171 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 GRK3P35626 688 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 AHRP35869 848 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 SLC6A12P48065 614 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 TDGF1P3P51864 188 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 GPX6P59796 221 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 C2orf54Q08AI8 447 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 TRADDQ15628 312 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 TSNQ15631 228 aaKnown RBP10.4□□□□□ -0.74
SSBP3-206ENST00000420121 MINDY4Q4G0A6 757 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 PLAG1Q6DJT9 500 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 H3F3CQ6NXT2 135 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 NXPE4Q6UWF7 544 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 CAPN12Q6ZSI9 719 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 NKAPQ8N5F7 415 aaKnown RBP10.4□□□□□ -0.74
SSBP3-206ENST00000420121 PLPP5Q8NEB5 264 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 OR1N1Q8NGS0 311 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 UTP15Q8TED0 518 aaKnown RBP10.4□□□□□ -0.74
SSBP3-206ENST00000420121 CREB3L4Q8TEY5 395 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 TSLPQ969D9 159 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 RHBDF1Q96CC6 855 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 PEX11GQ96HA9 241 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 OR1F2PQ96R84 312 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 SLC6A16Q9GZN6 736 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 RNF32Q9H0A6 362 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 DPH5Q9H2P9 285 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 KLHL31Q9H511 634 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 PELI2Q9HAT8 420 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 POPDC3Q9HBV1 291 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 AGPAT4Q9NRZ5 378 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 ZFP69BQ9UJL9 534 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 SLC22A14Q9Y267 594 aa10.4□□□□□ -0.74
SSBP3-206ENST00000420121 TCRBV9S1A1TA0A576 114 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 FAM159BA6NKW6 160 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 TAPBPO15533 448 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms