RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CENPKQ9BS16 269 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 SLC6A16Q9GZN6 736 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 RXFP3Q9NSD7 469 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 TXLNGQ9NUQ3 528 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 ARMCX1Q9P291 453 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 TAGLN3Q9UI15 199 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 KNL1Q8NG31 2342 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 NCOR2Q9Y618 2525 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 TP53BP1Q12888 1972 aaPredicted RBP13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 LNP1A1A4G5 178 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 TXNDC9O14530 226 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZSCAN9O15535 394 aaPredicted RBP13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 FLRT2O43155 660 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 SIGLEC6O43699 453 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 SCELO95171 688 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 ETHE1O95571 254 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 GP1BAP07359 652 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 BCKDHAP12694 445 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 MAGP20916 626 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 PIK3R1P27986 724 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 CD1CP29017 333 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 GRK6P43250 576 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 LSSP48449 732 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 CLDN8P56748 225 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 MEF2AQ02078 507 aaPredicted RBP13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 ACSM2AQ08AH3 577 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 HYAL2Q12891 473 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 UBAP2LQ14157 1087 aaKnown RBP13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 SGO1Q5FBB7 561 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZC3H12BQ5HYM0 836 aaKnown RBP13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 IL23RQ5VWK5 629 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 ACSM2BQ68CK6 577 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 PRSS42Q7Z5A4 293 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 MINDY1Q8N5J2 469 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 PROKR1Q8TCW9 393 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 STARD8Q92502 1023 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 MTFMTQ96DP5 389 aaKnown RBP13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZNF764Q96H86 408 aaPredicted RBP13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 QRFPRQ96P65 431 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 HBEGFQ99075 208 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZNF717Q9BY31 904 aaPredicted RBP13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 DDX31Q9H8H2 851 aaKnown RBP13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 SLC52A3Q9NQ40 469 aa13.63□□□□□ -0.23
SHMT1P1-201ENST00000419974 FEZF1A0PJY2 475 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 BBIP1A8MTZ0 92 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 CAPN5O15484 640 aaPredicted RBP13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 CTSVO60911 334 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 SLC22A3O75751 556 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 MYO1DO94832 1006 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 KIAA0754O94854 1291 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 ANKRD34CP0C6C1 535 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 SMIM10L1P0DMW3 83 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 G6PDP11413 515 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 TYRP1P17643 537 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 ASMTP46597 345 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 EMP3P54852 163 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 STXBP1P61764 594 aaKnown RBP13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 TRA2BP62995 288 aaKnown RBP13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 RPL38P63173 70 aaKnown RBP13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 RCAN2Q14206 197 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 DPY19L1Q2PZI1 675 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 FAM219BQ5XKK7 198 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 ADNP2Q6IQ32 1131 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 BLOC1S3Q6QNY0 202 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 CYP20A1Q6UW02 462 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 IKBIPQ70UQ0 350 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 PAGE2Q7Z2X7 111 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 VN1R4Q7Z5H5 301 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 CAMKMTQ7Z624 323 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 ADCK2Q7Z695 626 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 GATAD2AQ86YP4 633 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 FUNDC1Q8IVP5 155 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 RIMKLAQ8IXN7 391 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 DNAJC22Q8N4W6 341 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 C19orf47Q8N9M1 422 aaKnown RBP13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 RGMAQ96B86 450 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 TESCQ96BS2 214 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 SMIM10Q96HG1 83 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 SLC25A23Q9BV35 468 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 SMOC1Q9H4F8 434 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 ACTL8Q9H568 366 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 FSCN3Q9NQT6 498 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 PRDM9Q9NQV7 894 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 ARL8BQ9NVJ2 186 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 MCM8Q9UJA3 840 aa13.62□□□□□ -0.23
SHMT1P1-201ENST00000419974 CNOT1A5YKK6 2376 aaKnown RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 SPTBN2O15020 2390 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 PCM1Q15154 2024 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 COL5A1P20908 1838 aaPredicted RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 FAM234BA2RU67 622 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 URADA6NGE7 173 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZBTB11O95625 1053 aaPredicted RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 TGFB1P01137 390 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 NPPAP01160 153 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 SLC35G6P0C7Q6 338 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 PRPS1L1P21108 318 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 ACP1P24666 158 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 TIA1P31483 386 aaKnown RBP eCLIP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZFP36L2P47974 494 aaKnown RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 HNRNPFP52597 415 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms