RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 OR1F1O43749 312 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 TTC4O95801 387 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 CD46P15529 392 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 GABRB3P28472 473 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 GRNP28799 593 aaKnown RBP13.58□□□□□ -0.23
PAF1-202ENST00000416728 EEF1DP29692 281 aaKnown RBP13.58□□□□□ -0.23
PAF1-202ENST00000416728 CD96P40200 585 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 FNTAP49354 379 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 CCR8P51685 355 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 CDKN2DP55273 166 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 TAS2R50P59544 299 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 IL2P60568 153 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 SKP1P63208 163 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 RHAGQ02094 409 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 OC90Q02509 493 aaPredicted RBP13.58□□□□□ -0.23
PAF1-202ENST00000416728 PPP1R7Q15435 360 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 OR1C1Q15619 314 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 RBM20Q5T481 1227 aaKnown RBP13.58□□□□□ -0.23
PAF1-202ENST00000416728 RNASEH2BQ5TBB1 312 aaKnown RBP13.58□□□□□ -0.23
PAF1-202ENST00000416728 KIAA0408Q6ZU52 694 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 TBC1D19Q8N5T2 526 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 MDS2Q8NDY4 140 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 ABHD11Q8NFV4 315 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 OR5T3Q8NGG3 340 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 PYCR2Q96C36 320 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 SNF8Q96H20 258 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 MAGED4Q96JG8 741 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 SIGLEC12Q96PQ1 595 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 TRIM54Q9BYV2 358 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 CHST11Q9NPF2 352 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 LANCL2Q9NS86 450 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 ARL15Q9NXU5 204 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 CRYBG3Q68DQ2 2970 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 CPAMD8Q8IZJ3 1885 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 GABRR3A8MPY1 467 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 GALR3O60755 368 aaPredicted RBP13.58□□□□□ -0.24
PAF1-202ENST00000416728 AHSGP02765 367 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 SERPIND1P05546 499 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 FHP07954 510 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 JAK1P23458 1154 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 HTR1EP28566 365 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 ST13P50502 369 aaKnown RBP13.58□□□□□ -0.24
PAF1-202ENST00000416728 AP1S2P56377 157 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 OR4D2P58180 307 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 MEF2AQ02078 507 aaPredicted RBP13.58□□□□□ -0.24
PAF1-202ENST00000416728 PDAP1Q13442 181 aaKnown RBP13.58□□□□□ -0.24
PAF1-202ENST00000416728 PWP1Q13610 501 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 USP10Q14694 798 aaKnown RBP13.58□□□□□ -0.24
PAF1-202ENST00000416728 DEFB134Q4QY38 66 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 SPANXN3Q5MJ09 141 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 DUPD1Q68J44 220 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 SPINK14Q6IE38 97 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 NIPAL1Q6NVV3 410 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 CNTN4Q8IWV2 1026 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 AFAP1L2Q8N4X5 818 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 HORMAD2Q8N7B1 307 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 TMEM178AQ8NBL3 297 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 ZNF740Q8NDX6 193 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 THAP3Q8WTV1 239 aaPredicted RBP13.58□□□□□ -0.24
PAF1-202ENST00000416728 TSLPQ969D9 159 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 TBC1D20Q96BZ9 403 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 SCMH1Q96GD3 660 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 NPAS2Q99743 824 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 NAT9Q9BTE0 207 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 SARGQ9BW04 601 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 HES7Q9BYE0 225 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 ASIC3Q9UHC3 531 aa13.58□□□□□ -0.24
PAF1-202ENST00000416728 ABCA12Q86UK0 2595 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 TRBC2A0A5B9 178 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 MAN1A2O60476 641 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 BANF1O75531 89 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 WISP2O76076 250 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 TSPAN12O95859 305 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 ESRRAP11474 423 aaPredicted RBP13.57□□□□□ -0.24
PAF1-202ENST00000416728 ALOX12P18054 663 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 ELAVL4P26378 380 aaKnown RBP13.57□□□□□ -0.24
PAF1-202ENST00000416728 SLC26A5P58743 744 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 ALDH6A1Q02252 535 aaKnown RBP13.57□□□□□ -0.24
PAF1-202ENST00000416728 RGS1Q08116 209 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 C3AR1Q16581 482 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 ZXDCQ2QGD7 858 aaPredicted RBP13.57□□□□□ -0.24
PAF1-202ENST00000416728 KRTCAP3Q53RY4 240 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 XKRXQ6PP77 449 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 LGI4Q8N135 537 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 GPATCH11Q8N954 259 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 FAM98AQ8NCA5 519 aaKnown RBP13.57□□□□□ -0.24
PAF1-202ENST00000416728 OR4K1Q8NGD4 311 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 OR56A3Q8NH54 315 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 ACTRT1Q8TDG2 376 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 ATL1Q8WXF7 558 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 CERS2Q96G23 380 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 GPR137Q96N19 417 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 OR4K3Q96R72 315 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 TSPAN10Q9H1Z9 355 aaPredicted RBP13.57□□□□□ -0.24
PAF1-202ENST00000416728 PPANQ9NQ55 473 aaKnown RBP13.57□□□□□ -0.24
PAF1-202ENST00000416728 TINAGQ9UJW2 476 aa13.57□□□□□ -0.24
PAF1-202ENST00000416728 ASPDHA6ND91 283 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 NPIPA5E9PKD4 350 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 NDC80O14777 642 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 CHST10O43529 356 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms