RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 LRFN1Q9P244 771 aa11.42□□□□□ -0.58
LIMS2-210ENST00000413578 VPS9D1Q9Y2B5 631 aa11.42□□□□□ -0.58
LIMS2-210ENST00000413578 DHRS7Q9Y394 339 aa11.42□□□□□ -0.58
LIMS2-210ENST00000413578 HRH3Q9Y5N1 445 aa11.42□□□□□ -0.58
LIMS2-210ENST00000413578 SCN2AQ99250 2005 aa11.42□□□□□ -0.58
LIMS2-210ENST00000413578 ZBTB14O43829 449 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 CDC123O75794 336 aaPredicted RBP11.41□□□□□ -0.58
LIMS2-210ENST00000413578 TSPAN12O95859 305 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 SYF2O95926 243 aaKnown RBP11.41□□□□□ -0.58
LIMS2-210ENST00000413578 TPP2P29144 1249 aaPredicted RBP11.41□□□□□ -0.58
LIMS2-210ENST00000413578 PTGER1P34995 402 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 MLF1P58340 268 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 MPP1Q00013 466 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 OC90Q02509 493 aaPredicted RBP11.41□□□□□ -0.58
LIMS2-210ENST00000413578 THEMIS2Q5TEJ8 643 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 MEX3BQ6ZN04 569 aaKnown RBP11.41□□□□□ -0.58
LIMS2-210ENST00000413578 PIWIL4Q7Z3Z4 852 aaKnown RBP11.41□□□□□ -0.58
LIMS2-210ENST00000413578 ASPGQ86U10 573 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 SLC26A11Q86WA9 606 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 RPS19BP1Q86WX3 136 aaKnown RBP11.41□□□□□ -0.58
LIMS2-210ENST00000413578 DENND6AQ8IWF6 608 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 KIF2BQ8N4N8 673 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 FAM98AQ8NCA5 519 aaKnown RBP11.41□□□□□ -0.58
LIMS2-210ENST00000413578 OR5T3Q8NGG3 340 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 ZCCHC10Q8TBK6 192 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 SLC13A3Q8WWT9 602 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 SDCCAG3Q96C92 435 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 POM121Q96HA1 1249 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 PEX11GQ96HA9 241 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 BAG1Q99933 345 aaPredicted RBP11.41□□□□□ -0.58
LIMS2-210ENST00000413578 RBCK1Q9BYM8 510 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 FAM129AQ9BZQ8 928 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 CDCP1Q9H5V8 836 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 ANKHQ9HCJ1 492 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 NPDC1Q9NQX5 325 aaPredicted RBP11.41□□□□□ -0.58
LIMS2-210ENST00000413578 ABCF3Q9NUQ8 709 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 TNFRSF10DQ9UBN6 386 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 PPT2Q9UMR5 302 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 NAALAD2Q9Y3Q0 740 aa11.41□□□□□ -0.58
LIMS2-210ENST00000413578 ZCWPW2A0A1B0GU75 182 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 FAM237BA0A1B0GVD1 139 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 FEZF1A0PJY2 475 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 EIF3FO00303 357 aaPredicted RBP11.4□□□□□ -0.58
LIMS2-210ENST00000413578 PRRG2O14669 202 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 NDC80O14777 642 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 FANCGO15287 622 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 DNAJB6O75190 326 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 AVILO75366 819 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 FHP07954 510 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 OR4D2P58180 307 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 TAS2R50P59544 299 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 TIAL1Q01085 375 aaKnown RBP eCLIP11.4□□□□□ -0.58
LIMS2-210ENST00000413578 MAPKAPK3Q16644 382 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 KCTD19Q17RG1 926 aaPredicted RBP11.4□□□□□ -0.58
LIMS2-210ENST00000413578 MEI1Q5TIA1 1274 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 ZNF470Q6ECI4 717 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 CAND1Q86VP6 1230 aaKnown RBP11.4□□□□□ -0.58
LIMS2-210ENST00000413578 CPNE9Q8IYJ1 553 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 EID3Q8N140 333 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 TXLNBQ8N3L3 684 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 MFSD9Q8NBP5 474 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 NFAM1Q8NET5 270 aaPredicted RBP11.4□□□□□ -0.58
LIMS2-210ENST00000413578 FAM57AQ8TBR7 257 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 CA5BP1Q8WTZ4 195 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 SGPP1Q9BX95 441 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 PCBD2Q9H0N5 130 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 FBXO6Q9NRD1 293 aaPredicted RBP11.4□□□□□ -0.58
LIMS2-210ENST00000413578 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 ADAMTS6Q9UKP5 1117 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 PDE10AQ9Y233 779 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 NEU2Q9Y3R4 380 aa11.4□□□□□ -0.58
LIMS2-210ENST00000413578 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.39□□□□□ -0.59
LIMS2-210ENST00000413578 IGKV3D-11A0A0A0MRZ8 115 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 ZNF860A6NHJ4 632 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 GALR3O60755 368 aaPredicted RBP11.39□□□□□ -0.59
LIMS2-210ENST00000413578 PAMP19021 973 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 SLC1A2P43004 574 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 KCNJ1P48048 391 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 CYB561P49447 251 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 HLCSP50747 726 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 ACTN3Q08043 901 aaPredicted RBP11.39□□□□□ -0.59
LIMS2-210ENST00000413578 CTBP1Q13363 440 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 HERC3Q15034 1050 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 CMPK2Q5EBM0 449 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 CAPN13Q6MZZ7 669 aaPredicted RBP11.39□□□□□ -0.59
LIMS2-210ENST00000413578 AGTRAPQ6RW13 159 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 LCTLQ6UWM7 567 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 UBE2R2Q712K3 238 aaPredicted RBP11.39□□□□□ -0.59
LIMS2-210ENST00000413578 C17orf64Q86WR6 236 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 POGLUT1Q8NBL1 392 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 ZNF740Q8NDX6 193 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 ABHD11Q8NFV4 315 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 C16orf52Q8NHV5 167 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 TBC1D20Q96BZ9 403 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 GPR21Q99679 349 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 TSGA10Q9BZW7 698 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 ZKSCAN5Q9Y2L8 839 aa11.39□□□□□ -0.59
LIMS2-210ENST00000413578 NAV3Q8IVL0 2385 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 A0A1B0GTH9 108 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 SAGE2PA6NJ88 616 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms