RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 PELI2Q9HAT8 420 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 ZFP69BQ9UJL9 534 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 DYRK1BQ9Y463 629 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 USP9YO00507 2555 aaPredicted RBP16.74■□□□□ 0.27
LSM5-204ENST00000409909 ZNF860A6NHJ4 632 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 NCF1BA6NI72 391 aaPredicted RBP16.73■□□□□ 0.27
LSM5-204ENST00000409909 NCF1CA8MVU1 366 aaPredicted RBP16.73■□□□□ 0.27
LSM5-204ENST00000409909 TAPBPO15533 448 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 VPS4BO75351 444 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 SERPIND1P05546 499 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 CELA2AP08217 269 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 PRR35P0CG20 571 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 NCF1P14598 390 aaPredicted RBP16.73■□□□□ 0.27
LSM5-204ENST00000409909 CD1DP15813 335 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 STMN1P16949 149 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 GNLYP22749 145 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 VARSP26640 1264 aaKnown RBP16.73■□□□□ 0.27
LSM5-204ENST00000409909 EFTUD2Q15029 972 aaKnown RBP eCLIP16.73■□□□□ 0.272e-6■■■■■ 33.5
LSM5-204ENST00000409909 OR4D1Q15615 310 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 GRTP1Q5TC63 336 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 IRAK1BP1Q5VVH5 260 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 C8orf74Q6P047 294 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 FRA10AC1Q70Z53 315 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 CISD2Q8N5K1 135 aaKnown RBP16.73■□□□□ 0.27
LSM5-204ENST00000409909 PPM1NQ8N819 430 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 OR5T3Q8NGG3 340 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 NT5CQ8TCD5 201 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 SNRNP40Q96DI7 357 aaKnown RBP16.73■□□□□ 0.27
LSM5-204ENST00000409909 UBXN10Q96LJ8 280 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 CYTH2Q99418 400 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 ILKAPQ9H0C8 392 aaPredicted RBP16.73■□□□□ 0.27
LSM5-204ENST00000409909 VPS4AQ9UN37 437 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 KCNE2Q9Y6J6 123 aa16.73■□□□□ 0.27
LSM5-204ENST00000409909 PCDH17O14917 1159 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 GALR3O60755 368 aaPredicted RBP16.72■□□□□ 0.27
LSM5-204ENST00000409909 WDR47O94967 919 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 SERPINA7P05543 415 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 C8orf89P0DMQ9 161 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 SPRP35270 261 aaPredicted RBP16.72■□□□□ 0.27
LSM5-204ENST00000409909 AHRP35869 848 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 KCNC1P48547 511 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 RAB10P61026 200 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 HYAL2Q12891 473 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 UBAP2LQ14157 1087 aaKnown RBP16.72■□□□□ 0.27
LSM5-204ENST00000409909 HERC3Q15034 1050 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 MINDY4Q4G0A6 757 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 ISLR2Q6UXK2 745 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 SLCO4C1Q6ZQN7 724 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 LINC00696Q6ZRV3 163 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 LANCL3Q6ZV70 420 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 TMPRSS11BQ86T26 416 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 GPSM1Q86YR5 675 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 IQCKQ8N0W5 287 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 TBC1D19Q8N5T2 526 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 IMMP1LQ96LU5 166 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 WDR77Q9BQA1 342 aaPredicted RBP16.72■□□□□ 0.27
LSM5-204ENST00000409909 AIF1LQ9BQI0 150 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 TMEM79Q9BSE2 394 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 PCDHGA10Q9Y5H3 936 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 ESPL1Q14674 2120 aa16.72■□□□□ 0.27
LSM5-204ENST00000409909 SCN2AQ99250 2005 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 IGHV3-20A0A0C4DH32 117 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 TCP11X1B4DZS4 312 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 ZNF888P0CJ79 500 aaPredicted RBP16.71■□□□□ 0.27
LSM5-204ENST00000409909 ALOX12P18054 663 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 STX2P32856 288 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 SOX11P35716 441 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 GGT5P36269 586 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 DLG1Q12959 904 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 MFAP5Q13361 173 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 RBBP5Q15291 538 aaKnown RBP16.71■□□□□ 0.27
LSM5-204ENST00000409909 WHAMMP3Q1A5X7 153 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 DEFB134Q4QY38 66 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 FBXO48Q5FWF7 155 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 UBAP2Q5T6F2 1119 aaKnown RBP16.71■□□□□ 0.27
LSM5-204ENST00000409909 MFSD4BQ5TF39 518 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 CMC1Q7Z7K0 106 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 DNAJB14Q8TBM8 379 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 BRIX1Q8TDN6 353 aaKnown RBP16.71■□□□□ 0.27
LSM5-204ENST00000409909 UTP15Q8TED0 518 aaKnown RBP16.71■□□□□ 0.27
LSM5-204ENST00000409909 CREB3L4Q8TEY5 395 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 PPP4R1Q8TF05 950 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 METTL21AQ8WXB1 218 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 ESAMQ96AP7 390 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 PEX11GQ96HA9 241 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 LMF1Q96S06 567 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 SLC6A16Q9GZN6 736 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 AICDAQ9GZX7 198 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 KLHL31Q9H511 634 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 LANCL2Q9NS86 450 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 RIC8BQ9NVN3 520 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 ASF1BQ9NVP2 202 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 MAP10Q9P2G4 905 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 NTNG1Q9Y2I2 539 aa16.71■□□□□ 0.27
LSM5-204ENST00000409909 PRAMEF4O60810 478 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 CYC1P08574 325 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 SLC35E2BP0CK96 405 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 SMIM10L1P0DMW3 83 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 C1GALT1C1LP0DN25 315 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 ITGAMP11215 1152 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms