RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PDE1BQ01064 536 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 CDR2Q01850 454 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 GFPT1Q06210 699 aaPredicted RBP4.11□□□□□ -1.75
CLK1-203ENST00000409769 MAD2L1Q13257 205 aaPredicted RBP4.11□□□□□ -1.75
CLK1-203ENST00000409769 PCGF3Q3KNV8 242 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 ACCSLQ4AC99 568 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 CEP85LQ5SZL2 805 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 C18orf63Q68DL7 685 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 ARHGAP17Q68EM7 881 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 FUT10Q6P4F1 479 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 FAM171BQ6P995 826 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 PAPD4Q6PIY7 484 aaKnown RBP4.11□□□□□ -1.75
CLK1-203ENST00000409769 C9orf139Q6ZV77 190 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 ZSCAN30Q86W11 494 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 ZNF677Q86XU0 584 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.11□□□□□ -1.75
CLK1-203ENST00000409769 CCDC13Q8IYE1 715 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 ADGRF2Q8IZF7 708 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 CCAR2Q8N163 923 aaKnown RBP4.11□□□□□ -1.75
CLK1-203ENST00000409769 SLC39A11Q8N1S5 342 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 TMEM86AQ8N2M4 240 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 WDTC1Q8N5D0 677 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 COLGALT1Q8NBJ5 622 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 APPL2Q8NEU8 664 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 OR10T2Q8NGX3 314 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 SLC20A1Q8WUM9 679 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 UCMAQ8WVF2 138 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 PIGTQ969N2 578 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 TRIM44Q96DX7 344 aaPredicted RBP4.11□□□□□ -1.75
CLK1-203ENST00000409769 CCDC42Q96M95 316 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 WDFY2Q96P53 400 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 MTERF1Q99551 399 aaKnown RBP4.11□□□□□ -1.75
CLK1-203ENST00000409769 CMKLR1Q99788 373 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 ACBD6Q9BR61 282 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 DPEP3Q9H4B8 488 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 ZNHIT6Q9NWK9 470 aaKnown RBP4.11□□□□□ -1.75
CLK1-203ENST00000409769 DONSONQ9NYP3 566 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 TAS2R14Q9NYV8 317 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 OR14J1Q9UGF5 321 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 FBXW11Q9UKB1 542 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 ADAM28Q9UKQ2 775 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 PADI1Q9ULC6 663 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 PPP2R2CQ9Y2T4 447 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 LYVE1Q9Y5Y7 322 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 OBSL1O75147 1896 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 ANAPC1Q9H1A4 1944 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 DOCK6Q96HP0 2047 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 ARHGEF37A1IGU5 675 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 BTNL10A8MVZ5 291 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 A8MXQ7 604 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 FAM90A26D6RGX4 464 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 I3L4J1 428 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 HUS1O60921 280 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 LSM8O95777 96 aaKnown RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 CCDC175P0C221 793 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 ODC1P11926 461 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 TNFAIP3P21580 790 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 ACADLP28330 430 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 CYLC1P35663 651 aaPredicted RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 GNL1P36915 607 aaPredicted RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 OR1G1P47890 313 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 GSCP56915 257 aaPredicted RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 PITX1P78337 314 aaPredicted RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 YWHAHQ04917 246 aaPredicted RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 ELAVL2Q12926 359 aaKnown RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 MAMLD1Q13495 774 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 BTG3Q14201 252 aaPredicted RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 ZNF234Q14588 700 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 SHHQ15465 462 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 PNLIPRP3Q17RR3 467 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 TAF3Q5VWG9 929 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 ALKBH5Q6P6C2 394 aaKnown RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 LCLAT1Q6UWP7 414 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 MEX3BQ6ZN04 569 aaKnown RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 ZNF704Q6ZNC4 412 aaPredicted RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 C1orf122Q6ZSJ8 110 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 PAQR9Q6ZVX9 377 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 ASB18Q6ZVZ8 466 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 RSRC2Q7L4I2 434 aaKnown RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 ACOT1Q86TX2 421 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 PHF13Q86YI8 300 aaPredicted RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 GPR65Q8IYL9 337 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 C12orf29Q8N999 325 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 OR5R1Q8NH85 324 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 DUSP19Q8WTR2 217 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 FEM1CQ96JP0 617 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 EGLN2Q96KS0 407 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 ZNF558Q96NG5 402 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 UHRF2Q96PU4 802 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 RAD9AQ99638 391 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 HNRNPABQ99729 332 aaKnown RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 DESI2Q9BSY9 194 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 ITPAQ9BY32 194 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 LHX5Q9H2C1 402 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 PRO3102Q9H379 93 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 SLC28A3Q9HAS3 691 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 HCFC1R1Q9NWW0 138 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 MTMR10Q9NXD2 777 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 DDX43Q9NXZ2 648 aaKnown RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 CYTH4Q9UIA0 394 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms