RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PSMG3-AS1Q96PY0 264 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 VN1R1Q9GZP7 353 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 LRRC4CQ9HCJ2 640 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 ASF1BQ9NVP2 202 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 LRRK2Q5S007 2527 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 TRAV17A0A0B4J275 112 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 MASP2O00187 686 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 NDUFS4O43181 175 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 RAD51CO43502 376 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 GALR3O60755 368 aaPredicted RBP13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 KLHL18O94889 574 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 SERPINA6P08185 405 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 GP1BBP13224 206 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 STMN1P16949 149 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 SPRP35270 261 aaPredicted RBP13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 SOX11P35716 441 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 GGT5P36269 586 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 GP5P40197 560 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 ARG2P78540 354 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 SRSF1Q07955 248 aaKnown RBP eCLIP13.73□□□□□ -0.217e-6■□□□□ 10.7
NIF3L1-205ENST00000409588 FASTKD3Q14CZ7 662 aaKnown RBP13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 PCOLCEQ15113 449 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 EXT1Q16394 746 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 MINDY4Q4G0A6 757 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 GRTP1Q5TC63 336 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 PLAG1Q6DJT9 500 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 FRA10AC1Q70Z53 315 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 CCDC91Q7Z6B0 441 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 EGFL8Q99944 293 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 NT5DC2Q9H857 520 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 SAYSD1Q9NPB0 183 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 STMN3Q9NZ72 180 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 GPRC5BQ9NZH0 403 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 SLC17A6Q9P2U8 582 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 SH2B3Q9UQQ2 575 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 SLC22A14Q9Y267 594 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 NAALAD2Q9Y3Q0 740 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 HECTD1Q9ULT8 2610 aa13.73□□□□□ -0.21
NIF3L1-205ENST00000409588 TCRBV9S1A1TA0A576 114 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 CCDC189A1A4V9 331 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 SYNDIG1LA6NDD5 238 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 FAM159BA6NKW6 160 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 MAGEB17A8MXT2 336 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 SGK494L7N484 410 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 CDC7O00311 574 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 FANCGO15287 622 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 IL1RNP18510 177 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 SSTR1P30872 391 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 TNFSF10P50591 281 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 MAT1AQ00266 395 aaKnown RBP13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 CDC16Q13042 620 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 NAB1Q13506 487 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 USP10Q14694 798 aaKnown RBP13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 TGFBIQ15582 683 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 SYT16Q17RD7 645 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 MFSD4BQ5TF39 518 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 ABHD17BQ5VST6 288 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 H3F3CQ6NXT2 135 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 LINC00696Q6ZRV3 163 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 CEP128Q6ZU80 1094 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 CEP97Q8IW35 865 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 KRT78Q8N1N4 520 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 ST6GALNAC3Q8NDV1 305 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 ZNF740Q8NDX6 193 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 SUN3Q8TAQ9 357 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 M1APQ8TC57 530 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 SSC4DQ8WTU2 575 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 FAR1Q8WVX9 515 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 TBC1D20Q96BZ9 403 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 RHBDF1Q96CC6 855 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 C19orf60Q96EN9 201 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 ZNF354BQ96LW1 612 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 GPR22Q99680 433 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 RBBP8Q99708 897 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 TSPYL1Q9H0U9 437 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 DPH5Q9H2P9 285 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 EHD1Q9H4M9 534 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 GRHL1Q9NZI5 618 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 LUZP4Q9P127 313 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 COPG2Q9UBF2 871 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 PCDHGB6Q9Y5F9 930 aa13.72□□□□□ -0.21
NIF3L1-205ENST00000409588 A0A088AWK7 358 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 ANKUB1A6NFN9 424 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 WISP3O95389 354 aaPredicted RBP13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 TUBB4AP04350 444 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 UQCRHP07919 91 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 FHP07954 510 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 C1GALT1C1LP0DN25 315 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 EDN3P14138 238 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 ZNF10P21506 573 aaPredicted RBP13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 STX2P32856 288 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 UQCRFS1P47985 274 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 SLC6A12P48065 614 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 PLTPP55058 493 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 STXBP1P61764 594 aaKnown RBP13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 EEF1A2Q05639 463 aaKnown RBP13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 CKAP4Q07065 602 aaKnown RBP13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 ACTN3Q08043 901 aaPredicted RBP13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 NSDHLQ15738 373 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 EIF2S3LQ2VIR3 472 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms