RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SMAD2Q15796 467 aaKnown RBP18.17■□□□□ 0.5
USP39-202ENST00000409025 ADCK2Q7Z695 626 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 FAM162AQ96A26 154 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 CENPNQ96H22 339 aaPredicted RBP18.17■□□□□ 0.5
USP39-202ENST00000409025 REXO5Q96IC2 774 aaKnown RBP18.17■□□□□ 0.5
USP39-202ENST00000409025 EXO1Q9UQ84 846 aaKnown RBP18.17■□□□□ 0.5
USP39-202ENST00000409025 V9GYQ6 96 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 A0A1W2PPC1 479 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 YY2O15391 372 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 OR1F1O43749 312 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 RASGRP1O95267 797 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 CHRNB1P11230 501 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 ENGP17813 658 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 RGS19P49795 217 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 TAS2R50P59544 299 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 SRP54P61011 504 aaKnown RBP18.16■□□□□ 0.5
USP39-202ENST00000409025 MRPS35P82673 323 aaKnown RBP18.16■□□□□ 0.5
USP39-202ENST00000409025 BLMHQ13867 455 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 FAM71E1Q6IPT2 247 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 OR52E4Q8NGH9 312 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 MTERF3Q96E29 417 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 RNF145Q96MT1 663 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 CIB1Q99828 191 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 CENPKQ9BS16 269 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 UGT2B28Q9BY64 529 aa18.16■□□□□ 0.5
USP39-202ENST00000409025 C6orf106Q9H6K1 298 aaPredicted RBP18.16■□□□□ 0.5
USP39-202ENST00000409025 MRPS30Q9NP92 439 aaKnown RBP18.16■□□□□ 0.5
USP39-202ENST00000409025 PRAMEF33A0A0G2JMD5 474 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 MAGEA13PA6NCF6 341 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 PRAMEF26H0Y7S4 382 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 RNASET2O00584 256 aaKnown RBP18.15■□□□□ 0.5
USP39-202ENST00000409025 FURINP09958 794 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 ACTR1BP42025 376 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 CCR5P51681 352 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 ACTR1AP61163 376 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 ABATP80404 500 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 PRKCQQ04759 706 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 FAM98BQ52LJ0 330 aaKnown RBP18.15■□□□□ 0.5
USP39-202ENST00000409025 CCNYL2Q5T2Q4 361 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 KIAA0895LQ68EN5 471 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 ZBTB49Q6ZSB9 765 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 Q6ZSR6 202 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 IKBIPQ70UQ0 350 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 SYT13Q7L8C5 426 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 PAGE2Q7Z2X7 111 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 SERPINA11Q86U17 422 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 TMEM145Q8NBT3 493 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 NCLNQ969V3 563 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 PPCDCQ96CD2 204 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 PHF12Q96QT6 1004 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 F2RL3Q96RI0 385 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 SPASTQ9UBP0 616 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 PCOLCE2Q9UKZ9 415 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 CYP8B1Q9UNU6 501 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 FAM149AA5PLN7 773 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 C10orf142B7Z368 130 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 PLPP1O14494 284 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 DENRO43583 198 aaKnown RBP18.15■□□□□ 0.5
USP39-202ENST00000409025 PRICKLE3O43900 615 aaPredicted RBP18.15■□□□□ 0.5
USP39-202ENST00000409025 KLHL18O94889 574 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 CCNDBP1O95273 360 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 TBX6O95947 436 aaPredicted RBP18.15■□□□□ 0.5
USP39-202ENST00000409025 ZCCHC18P0CG32 403 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 EFNA1P20827 205 aaPredicted RBP18.15■□□□□ 0.5
USP39-202ENST00000409025 SHMT2P34897 504 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 GRK3P35626 688 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 CHRNB3Q05901 458 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 PDE7AQ13946 482 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 TCEA2Q15560 299 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 C10orf111Q8N326 155 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 TTLQ8NG68 377 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 GATA6Q92908 595 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 QRFPRQ96P65 431 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 CHID1Q9BWS9 393 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 TMEM168Q9H0V1 697 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 VPS4AQ9UN37 437 aa18.15■□□□□ 0.5
USP39-202ENST00000409025 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.15■□□□□ 0.5
USP39-202ENST00000409025 IGKV1-8A0A0C4DH67 115 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 TRBC2A0A5B9 178 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 ARHGAP10A1A4S6 786 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 EIF4E1BA6NMX2 242 aaKnown RBP18.14■□□□□ 0.49
USP39-202ENST00000409025 CHURC1-FNTBB4DL54 471 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 CREG1O75629 220 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 EML2O95834 649 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 IGHV4-34P06331 123 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 RAP2AP10114 183 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 GPX2P18283 190 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 PPIBP23284 216 aaKnown RBP18.14■□□□□ 0.49
USP39-202ENST00000409025 TPP2P29144 1249 aaPredicted RBP18.14■□□□□ 0.49
USP39-202ENST00000409025 RABIFP47224 123 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 CCT8P50990 548 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 MC1RQ01726 317 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 SLC14A1Q13336 389 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 ATP6AP1Q15904 470 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 NRF1Q16656 503 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 ALG11Q2TAA5 492 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 ZNF385BQ569K4 471 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 SLC30A9Q6PML9 568 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 OR4A15Q8NGL6 344 aa18.14■□□□□ 0.49
USP39-202ENST00000409025 CCL4L1Q8NHW4 92 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms