RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 RIPOR1Q6ZS17 1223 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 THOC6Q86W42 341 aaKnown RBP18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 BBOF1Q8ND07 529 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 GRHL3Q8TE85 626 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 SSC4DQ8WTU2 575 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 UNKQ9C0B0 810 aaKnown RBP18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 GRHL1Q9NZI5 618 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 WHRNQ9P202 907 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 SLC22A14Q9Y267 594 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 CENPEQ02224 2701 aa18.21■□□□□ 0.5
SMARCB1-204ENST00000407422 FAM187AA6NFU0 413 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 CDC123O75794 336 aaPredicted RBP18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 ARG2P78540 354 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 CALCOCO2Q13137 446 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 TSNQ15631 228 aaKnown RBP18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 C18orf21Q32NC0 220 aaPredicted RBP18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 CPEB2Q7Z5Q1 589 aaKnown RBP18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 AFAP1L2Q8N4X5 818 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 OR1N1Q8NGS0 311 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 ANKRD7Q92527 254 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 PEX11GQ96HA9 241 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 TUBB6Q9BUF5 446 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 CAB39LQ9H9S4 337 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 GPAMQ9HCL2 828 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 AGPAT4Q9NRZ5 378 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 MTO1Q9Y2Z2 717 aaKnown RBP18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 DIDO1Q9BTC0 2240 aaKnown RBP18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 NDC80O14777 642 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 WFS1O76024 890 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 SCTRP47872 440 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 PWP1Q13610 501 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 HERC3Q15034 1050 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 DEFB134Q4QY38 66 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 MAATS1Q7Z4T9 603 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 SPATA6LQ8N4H0 392 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 ANKRD53Q8N9V6 530 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 EGFL8Q99944 293 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 NSMCE4AQ9NXX6 385 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 ZFP69BQ9UJL9 534 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 ERRFI1Q9UJM3 462 aaPredicted RBP18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 DYRK1BQ9Y463 629 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 OARD1Q9Y530 152 aa18.2■□□□□ 0.5
SMARCB1-204ENST00000407422 CRYBG3Q68DQ2 2970 aa18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 GALR3O60755 368 aaPredicted RBP18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 WISP3O95389 354 aaPredicted RBP18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 UQCRHP07919 91 aa18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 ICAM2P13598 275 aa18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 TNFSF10P50591 281 aa18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 OLR1P78380 273 aa18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 REEP5Q00765 189 aa18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 HIST2H2BCQ6DN03 193 aa18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 ANKRD37Q7Z713 158 aa18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 TMPRSS11BQ86T26 416 aa18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 LANCL2Q9NS86 450 aa18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 CTNNAL1Q9UBT7 734 aa18.19■□□□□ 0.5
SMARCB1-204ENST00000407422 TCRBV9S1A1TA0A576 114 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 DYTNA2CJ06 578 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 WDPCPO95876 746 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 ZNF888P0CJ79 500 aaPredicted RBP18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 ALOX12P18054 663 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 CASQ1P31415 396 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 GDF5P43026 501 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 CDKL1Q00532 357 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 RHAGQ02094 409 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 TRADDQ15628 312 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 NXPE4Q6UWF7 544 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 TBC1D19Q8N5T2 526 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 NT5CQ8TCD5 201 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 FAR1Q8WVX9 515 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 HAS2Q92819 552 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 PELI2Q9HAT8 420 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 POPDC3Q9HBV1 291 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 KCNE2Q9Y6J6 123 aa18.18■□□□□ 0.5
SMARCB1-204ENST00000407422 NCF1BA6NI72 391 aaPredicted RBP18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 NCF1CA8MVU1 366 aaPredicted RBP18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 E2F3O00716 465 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 PHGDHO43175 533 aaKnown RBP18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 C1QAP02745 245 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 CYC1P08574 325 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 NCF1P14598 390 aaPredicted RBP18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 AHRP35869 848 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 HNF4AP41235 474 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 SLC12A2P55011 1212 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 GPX6P59796 221 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 POU4F1Q01851 419 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 RGS1Q08116 209 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 HYAL2Q12891 473 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 ELOAQ14241 798 aaKnown RBP18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 ABRAXAS2Q15018 415 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 BTBD16Q32M84 506 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 SYT10Q6XYQ8 523 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 FRA10AC1Q70Z53 315 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 ADAMTSL2Q86TH1 951 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 ST6GALNAC3Q8NDV1 305 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 UTP15Q8TED0 518 aaKnown RBP18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 TSLPQ969D9 159 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 RHBDF1Q96CC6 855 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 KLHL31Q9H511 634 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 C19orf25Q9UFG5 118 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms