RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ANKMY1Q9P2S6 941 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 NCOR2Q9Y618 2525 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 IGKV1-8A0A0C4DH67 115 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 BTN3A3O00478 584 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 CLEC3AO75596 197 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 ETHE1O95571 254 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 TGFB1P01137 390 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 NPPAP01160 153 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 ANXA6P08133 673 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 PRPS1L1P21108 318 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 IL12AP29459 219 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 TIA1P31483 386 aaKnown RBP eCLIP20.11■□□□□ 0.815e-8■□□□□ 8.7
TPM1-208ENST00000404484 ZFP36L2P47974 494 aaKnown RBP20.11■□□□□ 0.81
TPM1-208ENST00000404484 YBX1P67809 324 aaKnown RBP20.11■□□□□ 0.81
TPM1-208ENST00000404484 FOXM1Q08050 763 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 DPY19L1Q2PZI1 675 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 TIGD2Q4W5G0 525 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 PIP4P1Q86T03 277 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 HOPXQ9BPY8 73 aaPredicted RBP20.11■□□□□ 0.81
TPM1-208ENST00000404484 UCK1Q9HA47 277 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 CROTQ9UKG9 612 aa20.11■□□□□ 0.81
TPM1-208ENST00000404484 A0A088AWK7 358 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 OR6C74A6NCV1 312 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 C2orf74A8MZ97 194 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 C9JVG2 144 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 KCNK5O95279 499 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 ZNF883P0CG24 379 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 AHRP35869 848 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 FASLGP48023 281 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 C21orf58P58505 322 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 PSME3P61289 254 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 WASHC2DQ5SRD0 308 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 ZNF425Q6IV72 752 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 CYB5D1Q6P9G0 228 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 VN1R5Q7Z5H4 357 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 METTL4Q8N3J2 472 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 ANKRD53Q8N9V6 530 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 TSSK3Q96PN8 268 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 MS4A8Q9BY19 250 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 OR51B5Q9H339 312 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 ACTR10Q9NZ32 417 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 BAIAP2L1Q9UHR4 511 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.1■□□□□ 0.81
TPM1-208ENST00000404484 SPEGQ15772 3267 aa20.1■□□□□ 0.81
TPM1-208ENST00000404484 FEZF1A0PJY2 475 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 GSAPA4D1B5 854 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 YY2O15391 372 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 PCDH7O60245 1069 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 CSRP1P21291 193 aaKnown RBP20.09■□□□□ 0.81
TPM1-208ENST00000404484 KHDRBS2Q5VWX1 349 aaKnown RBP20.09■□□□□ 0.81
TPM1-208ENST00000404484 KLHL35Q6PF15 583 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 DBX2Q6ZNG2 339 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 ERMP1Q7Z2K6 904 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 RETREG3Q86VR2 466 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 OOSP2Q86WS3 158 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 C10orf67Q8IYJ2 551 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 DEFB124Q8NES8 71 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 GPR156Q8NFN8 814 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 OR10G6Q8NH81 332 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 TMEM131Q92545 1883 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 VPS33AQ96AX1 596 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 TESCQ96BS2 214 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 QRFPRQ96P65 431 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 ELF4Q99607 663 aaPredicted RBP20.09■□□□□ 0.81
TPM1-208ENST00000404484 EBPLQ9BY08 206 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.09■□□□□ 0.81
TPM1-208ENST00000404484 CAAP1Q9H8G2 361 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 SPAG4Q9NPE6 437 aa20.09■□□□□ 0.81
TPM1-208ENST00000404484 TDRD6O60522 2096 aaKnown RBP20.09■□□□□ 0.81
TPM1-208ENST00000404484 SH3BP5O60239 455 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 PIAS2O75928 621 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 ANXA4P09525 319 aaPredicted RBP20.08■□□□□ 0.81
TPM1-208ENST00000404484 UGT2B7P16662 529 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 POLR2CP19387 275 aaPredicted RBP20.08■□□□□ 0.81
TPM1-208ENST00000404484 BIRC2Q13490 618 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 NFYCQ13952 458 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 TLR1Q15399 786 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 SHBQ15464 509 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 SLC5A12Q1EHB4 618 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 TRMT5Q32P41 509 aaKnown RBP20.08■□□□□ 0.81
TPM1-208ENST00000404484 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.08■□□□□ 0.81
TPM1-208ENST00000404484 DEPDC1Q5TB30 811 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 KIAA1614Q5VZ46 1190 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 ARMC6Q6NXE6 501 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 PGM2L1Q6PCE3 622 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 MSANTD1Q6ZTZ1 278 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 PAGE2Q7Z2X7 111 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 COMMD6Q7Z4G1 85 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 NET1Q7Z628 596 aaPredicted RBP20.08■□□□□ 0.81
TPM1-208ENST00000404484 FBXW8Q8N3Y1 598 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 DPP10Q8N608 796 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 TRPV3Q8NET8 790 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 CLHC1Q8NHS4 586 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 OR2A14Q96R47 310 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 CSNK1G3Q9Y6M4 447 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 HEATR5BQ9P2D3 2071 aa20.08■□□□□ 0.81
TPM1-208ENST00000404484 A0A1B0GTQ1 180 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 GNG14A0A1W2PPG7 69 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 ZW10O43264 779 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 MGRN1O60291 552 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms