RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CPLX4Q7Z7G2 160 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 HPS6Q86YV9 775 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 ARHGEF39Q8N4T4 335 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 OR4K1Q8NGD4 311 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 ACMSDQ8TDX5 336 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 ZNF473Q8WTR7 871 aaKnown RBP13.84□□□□□ -0.19
SEC13-208ENST00000397109 MRRFQ96E11 262 aaKnown RBP13.84□□□□□ -0.19
SEC13-208ENST00000397109 MMABQ96EY8 250 aaPredicted RBP13.84□□□□□ -0.19
SEC13-208ENST00000397109 SARGQ9BW04 601 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 SOX17Q9H6I2 414 aaPredicted RBP13.84□□□□□ -0.19
SEC13-208ENST00000397109 SYNPO2LQ9H987 977 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 CAB39LQ9H9S4 337 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 ATP13A2Q9NQ11 1180 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 C14orf105Q9NVL8 296 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 MKS1Q9NXB0 559 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 GPR83Q9NYM4 423 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 SH2B3Q9UQQ2 575 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 DYRK1BQ9Y463 629 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 KCNE2Q9Y6J6 123 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 BSNQ9UPA5 3926 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 TRBC2A0A5B9 178 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 FEZF1A0PJY2 475 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 H0YIG0 161 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 P2RX6O15547 441 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 FOXS1O43638 330 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 CCDC166P0CW27 439 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 SLC26A3P40879 764 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 CASRP41180 1078 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 BMPR2Q13873 1038 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 RBBP7Q16576 425 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 CDKL4Q5MAI5 379 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 MROH9Q5TGP6 573 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 GKAP1Q5VSY0 366 aaPredicted RBP13.83□□□□□ -0.2
SEC13-208ENST00000397109 VN1R4Q7Z5H5 301 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 ASPGQ86U10 573 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 THOC6Q86W42 341 aaKnown RBP13.83□□□□□ -0.2
SEC13-208ENST00000397109 TCAIMQ8N3R3 496 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 DTWD1Q8N5C7 304 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 BANPQ8N9N5 519 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 MFSD9Q8NBP5 474 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 SLC13A3Q8WWT9 602 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 SLC5A11Q8WWX8 675 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 TM4SF19Q96DZ7 209 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 OR4K3Q96R72 315 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 CRB3Q9BUF7 120 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 YIPF2Q9BWQ6 316 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 MKKSQ9NPJ1 570 aaPredicted RBP13.83□□□□□ -0.2
SEC13-208ENST00000397109 TRPC4Q9UBN4 977 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 MAP4K5Q9Y4K4 846 aa13.83□□□□□ -0.2
SEC13-208ENST00000397109 A0A0A6YYC8 382 aaPredicted RBP13.82□□□□□ -0.2
SEC13-208ENST00000397109 ERICH4A6NGS2 130 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 A6NL46 340 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 TRIM49D1C9J1S8 452 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 I3L1I5 382 aaPredicted RBP13.82□□□□□ -0.2
SEC13-208ENST00000397109 K7EM74 188 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 PCDH17O14917 1159 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 PHGDHO43175 533 aaKnown RBP13.82□□□□□ -0.2
SEC13-208ENST00000397109 LCMT2O60294 686 aaKnown RBP13.82□□□□□ -0.2
SEC13-208ENST00000397109 SLC35G6P0C7Q6 338 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 CREB1P16220 341 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 CRABP2P29373 138 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 BCL6P41182 706 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 SERPINB8P50452 374 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 SEC24CP53992 1094 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 SOX8P57073 446 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 FOXL2P58012 376 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 KLC1Q07866 573 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 AIMP2Q13155 320 aaKnown RBP13.82□□□□□ -0.2
SEC13-208ENST00000397109 TGFBIQ15582 683 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 SHISA6Q6ZSJ9 500 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 SH2D5Q6ZV89 423 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 GPSM1Q86YR5 675 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 KLHDC8AQ8IYD2 350 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 FDCSPQ8NFU4 85 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 NEIL2Q969S2 332 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 RHBDF1Q96CC6 855 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 UBXN10Q96LJ8 280 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 TGIF2Q9GZN2 237 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 VPS11Q9H270 941 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 PELI2Q9HAT8 420 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 SNX15Q9NRS6 342 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 C5AR2Q9P296 337 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 SLC22A14Q9Y267 594 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 HS3ST3B1Q9Y662 390 aa13.82□□□□□ -0.2
SEC13-208ENST00000397109 GCN1Q92616 2671 aaKnown RBP13.82□□□□□ -0.2
SEC13-208ENST00000397109 SOCS6O14544 535 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 OR1F1O43749 312 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 NSA2O95478 260 aaKnown RBP13.81□□□□□ -0.2
SEC13-208ENST00000397109 SLC35E2BP0CK96 405 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 CD1DP15813 335 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 EMP2P54851 167 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 PWP1Q13610 501 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 MPP2Q14168 576 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 MYBPC3Q14896 1274 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 VWA2Q5GFL6 755 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 VWA5B1Q5TIE3 1220 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 TMEM214Q6NUQ4 689 aaKnown RBP13.81□□□□□ -0.2
SEC13-208ENST00000397109 RAPH1Q70E73 1250 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 CMC1Q7Z7K0 106 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 GALNT16Q8N428 558 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms