RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TGM7Q96PF1 710 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 TSSK3Q96PN8 268 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 ZFYVE21Q9BQ24 234 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 RAB33BQ9H082 229 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 ACTL8Q9H568 366 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 C1GALT1Q9NS00 363 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 SIRT5Q9NXA8 310 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 PILRAQ9UKJ1 303 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 GNG14A0A1W2PPG7 69 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 ANXA4P09525 319 aaPredicted RBP19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 JAK1P23458 1154 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 TACR1P25103 407 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 POLR2JP52435 117 aaKnown RBP19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 GPLD1P80108 840 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 STX5Q13190 355 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 MMEL1Q495T6 779 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 PLA2G2CQ5R387 149 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 GALNT18Q6P9A2 607 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 BLOC1S3Q6QNY0 202 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 ASPGQ86U10 573 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 SLC13A3Q8WWT9 602 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 THAP11Q96EK4 314 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 ZDHHC12Q96GR4 267 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 TRAPPC9Q96Q05 1148 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 ZBTB18Q99592 522 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 MAP3K3Q99759 626 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 RTKNQ9BST9 563 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 REXO4Q9GZR2 422 aaKnown RBP19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 SYNPO2LQ9H987 977 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 EPHA6Q9UF33 1036 aa19.5■□□□□ 0.71
VCPKMT-202ENST00000395860 FAM234BA2RU67 622 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 CPED1A4D0V7 1026 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 LRIT2A6NDA9 550 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 PLPP1O14494 284 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 B4GAT1O43505 415 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 PRAMEF10O60809 474 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 PNLIPP16233 465 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 HNRNPH1P31943 449 aaKnown RBP19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 GFERP55789 205 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 CLDN8P56748 225 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 AMZ1Q400G9 498 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 RNF44Q7L0R7 432 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 C19orf47Q8N9M1 422 aaKnown RBP19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 WDR48Q8TAF3 677 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 RGMAQ96B86 450 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 OR2A5Q96R48 311 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 MACROD1Q9BQ69 325 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 GOLGA4Q13439 2230 aaKnown RBP19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 SLC9B1P1A6NJY1 282 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 AIM2O14862 343 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 IL12AP29459 219 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 ZFP36L2P47974 494 aaKnown RBP19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 RGS1Q08116 209 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 TMEM35AQ53FP2 167 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 TOR1AIP1Q5JTV8 583 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 VN1R4Q7Z5H5 301 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 CDC26Q8NHZ8 85 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 RERGQ96A58 199 aaPredicted RBP19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 RCN3Q96D15 328 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 SPDL1Q96EA4 605 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 CD180Q99467 661 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 BTBD10Q9BSF8 475 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 LRMDAQ9H2I8 198 aa19.49■□□□□ 0.71
VCPKMT-202ENST00000395860 LY6G6EA0A0G2JKS1 128 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 TLCD2A6NGC4 264 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 GYG2O15488 501 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 KLK1P06870 262 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 SLC35G6P0C7Q6 338 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 STXBP1P61764 594 aaKnown RBP19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 HYAL2Q12891 473 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 RCAN2Q14206 197 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 SUZ12Q15022 739 aaKnown RBP19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 GUSBP11Q6P575 273 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 RIPOR1Q6ZS17 1223 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 ASRGL1Q7L266 308 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 PAGE2Q7Z2X7 111 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 SPRED1Q7Z699 444 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 PLXDC1Q8IUK5 500 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 KRTCAP2Q8N6L1 136 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 GLB1L3Q8NCI6 653 aaPredicted RBP19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 RBM15BQ8NDT2 890 aaKnown RBP19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 FBXO27Q8NI29 283 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 TSPEARQ8WU66 669 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 EGLN2Q96KS0 407 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 NPAS2Q99743 824 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 SORBS1Q9BX66 1292 aaKnown RBP19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 KLHL31Q9H511 634 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 EFCAB1Q9HAE3 211 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 TAS2R1Q9NYW7 299 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 MCM8Q9UJA3 840 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 U3KQA8 63 aa19.48■□□□□ 0.71
VCPKMT-202ENST00000395860 CCDC154A6NI56 674 aa19.47■□□□□ 0.71
VCPKMT-202ENST00000395860 BBIP1A8MTZ0 92 aa19.47■□□□□ 0.71
VCPKMT-202ENST00000395860 RTCAO00442 366 aaKnown RBP19.47■□□□□ 0.71
VCPKMT-202ENST00000395860 ANGPT2O15123 496 aa19.47■□□□□ 0.71
VCPKMT-202ENST00000395860 KIF1CO43896 1103 aaKnown RBP19.47■□□□□ 0.71
VCPKMT-202ENST00000395860 LRATO95237 230 aa19.47■□□□□ 0.71
VCPKMT-202ENST00000395860 GBAP04062 536 aa19.47■□□□□ 0.71
VCPKMT-202ENST00000395860 ZNF883P0CG24 379 aa19.47■□□□□ 0.71
VCPKMT-202ENST00000395860 CAPN3P20807 821 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms