RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TTYH2Q9BSA4 534 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 SLC12A9Q9BXP2 914 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 P2RY12Q9H244 342 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 SARDHQ9UL12 918 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 C1QTNF3-AMACRE9PGA6 284 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 RGS10O43665 173 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 EFCAB14O75071 495 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 NDUFS2O75306 463 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 HRH2P25021 359 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 AZGP1P25311 298 aaKnown RBP10.17□□□□□ -0.78
CALD1-203ENST00000393118 CTSKP43235 329 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 CTSCP53634 463 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 YBX1P67809 324 aaKnown RBP10.17□□□□□ -0.78
CALD1-203ENST00000393118 GRIN2CQ14957 1233 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 SPATS1Q496A3 300 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 GCNT6Q5T4J0 391 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 TMEM236Q5W0B7 351 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 RFPL4BQ6ZWI9 263 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 PGBD3Q8N328 593 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 SLC43A3Q8NBI5 491 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 XAGE5Q8WWM1 108 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 EFHD2Q96C19 240 aaPredicted RBP10.17□□□□□ -0.78
CALD1-203ENST00000393118 EID2BQ96D98 161 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 PDLIM5Q96HC4 596 aaKnown RBP10.17□□□□□ -0.78
CALD1-203ENST00000393118 ZNF347Q96SE7 839 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 BEX2Q9BXY8 128 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 CTPS2Q9NRF8 586 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 ZNF224Q9NZL3 707 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 INTS6Q9UL03 887 aaKnown RBP10.17□□□□□ -0.78
CALD1-203ENST00000393118 IFT52Q9Y366 437 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 TET1Q8NFU7 2136 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 TRBV23OR9-2A0A075B6M9 112 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 A0A096LPI6 279 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 OR10H3O60404 316 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 LHCGRP22888 699 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 PPIBP23284 216 aaKnown RBP10.17□□□□□ -0.78
CALD1-203ENST00000393118 VIPR2P41587 438 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 RAB14P61106 215 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 PTSQ03393 145 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 NPTX1Q15818 432 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 PLEKHS1Q5SXH7 462 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 C6orf141Q5SZD1 244 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 ZNF773Q6PK81 442 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 TBPL2Q6SJ96 375 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 EPHX4Q8IUS5 362 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 UBE2J2Q8N2K1 259 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 LILRA3Q8N6C8 439 aaPredicted RBP10.17□□□□□ -0.78
CALD1-203ENST00000393118 UBE2E3Q969T4 207 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 PMEPA1Q969W9 287 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 SIPA1Q96FS4 1042 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 FERD3LQ96RJ6 166 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 SLC35A5Q9BS91 424 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 FAM118AQ9NWS6 357 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 THG1LQ9NWX6 298 aaKnown RBP10.17□□□□□ -0.78
CALD1-203ENST00000393118 PAQR5Q9NXK6 330 aaPredicted RBP10.17□□□□□ -0.78
CALD1-203ENST00000393118 ATP6V1HQ9UI12 483 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 ACSL6Q9UKU0 697 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 CORO2BQ9UQ03 480 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 ANGPT4Q9Y264 503 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 NUMA1Q14980 2115 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 C12orf71A8MTZ7 269 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 FAM220BPB1ANY3 271 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 BMP1P13497 986 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 TNFRSF1BP20333 461 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 PPP2R1BP30154 601 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 MAPK12P53778 367 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 OR2B6P58173 313 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 TAS2R50P59544 299 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 SLC36A3Q495N2 470 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 ATG9BQ674R7 924 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 HTR3DQ70Z44 454 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 CADM3Q8N126 398 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 TBC1D19Q8N5T2 526 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 SMAD5Q99717 465 aaKnown RBP10.17□□□□□ -0.78
CALD1-203ENST00000393118 CLCA2Q9UQC9 943 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 INSL6Q9Y581 213 aa10.17□□□□□ -0.78
CALD1-203ENST00000393118 CARNS1A5YM72 827 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 BTN3A3O00478 584 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 TPST2O60704 377 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 C6orf47O95873 294 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 ADH5P11766 374 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 SYN1P17600 705 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 CD247P20963 164 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 AGXTP21549 392 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 KDELR2P33947 212 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 ELP6Q0PNE2 266 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 TUBA3CQ13748 450 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 MED22Q15528 200 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 VMACQ2NL98 169 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 ZNF362Q5T0B9 420 aaPredicted RBP10.16□□□□□ -0.78
CALD1-203ENST00000393118 KLHDC8BQ8IXV7 354 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 MFSD2AQ8NA29 543 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 ABHD11Q8NFV4 315 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 GRPEL2Q8TAA5 225 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 NUS1Q96E22 293 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 LTB4R2Q9NPC1 389 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 THUMPD1Q9NXG2 353 aaKnown RBP10.16□□□□□ -0.78
CALD1-203ENST00000393118 DPP7Q9UHL4 492 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 BOLA1Q9Y3E2 137 aa10.16□□□□□ -0.78
CALD1-203ENST00000393118 A0A0G2JMZ2 1700 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms