RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ITGA1P56199 1179 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 SLC7A9P82251 487 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 CHIT1Q13231 466 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 CCDC149Q6ZUS6 474 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 CBLL1Q75N03 491 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 MED8Q96G25 268 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 ZFYVE19Q96K21 471 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 C7orf34Q96L11 122 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 HHIPQ96QV1 700 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 RUBCNLQ9H714 662 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 ERVW-1Q9UQF0 538 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 CDH23Q9H251 3354 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 TMEM229AB2RXF0 380 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 GFRA2O00451 464 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 GRM6O15303 877 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 KCNK2O95069 426 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 POP4O95707 220 aaKnown RBP15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 GRK3P35626 688 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 PPM1AP35813 382 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 PREPP48147 710 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 IDH2P48735 452 aaKnown RBP15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 GAB1Q13480 694 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 EIF3MQ7L2H7 374 aaKnown RBP15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 DNAJB8Q8NHS0 232 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 RIOK2Q9BVS4 552 aaKnown RBP15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 TPT1P8Q9HAU6 139 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 TDP1Q9NUW8 608 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 HSPE1-MOB4S4R3N1 261 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 TMEM202A6NGA9 273 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 KPNA3O00505 521 aaPredicted RBP15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 UPK1BO75841 260 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 LATS1O95835 1130 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 RHOP08100 348 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 EPCAMP16422 314 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 GPX2P18283 190 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 MAPK8P45983 427 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 DGKEP52429 567 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 KCNJ10P78508 379 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 MTAPQ13126 283 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 TP53BP2Q13625 1128 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 ARMC8Q8IUR7 673 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 P3H2Q8IVL5 708 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 POC5Q8NA72 575 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 SLC38A4Q969I6 547 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 FEVQ99581 238 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 OR51E2Q9H255 320 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 ANKMY1Q9P2S6 941 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 RPS6KA6Q9UK32 745 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 TMPRSS11EQ9UL52 423 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 DSCR3O14972 297 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 ETHE1O95571 254 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 DLGAP3O95886 979 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 TIGD6Q17RP2 521 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 ZNF404Q494X3 552 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 GPR33Q49SQ1 333 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 TMEM215Q68D42 235 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 GDPD4Q6W3E5 623 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 C12orf76Q8N812 135 aaPredicted RBP15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 IRF7Q92985 503 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 TBC1D20Q96BZ9 403 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 FZD4Q9ULV1 537 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 LILRB3O75022 631 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 C9P02748 559 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 POLR2EP19388 210 aaKnown RBP15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 SERPINB1P30740 379 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 IRS1P35568 1242 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 SPINT3P49223 89 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 UBE2UQ5VVX9 321 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 ANGPTL8Q6UXH0 198 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 GPR155Q7Z3F1 870 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 SPPL2AQ8TCT8 520 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 Q96MT0 163 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 PITX2Q99697 317 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 CCNB1IP1Q9NPC3 277 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 RAPGEFL1Q9UHV5 662 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 CHD7Q9P2D1 2997 aa15.66■□□□□ 0.1
NKX3-1-201ENST00000380871 SSX4O60224 188 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 PCDH7O60245 1069 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 TIMP1P01033 207 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 STSP08842 583 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 POU2F1P14859 743 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 SLC6A12P48065 614 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 SYTL1Q8IYJ3 562 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 MINDY2Q8NBR6 621 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 OR2A12Q8NGT7 310 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 VOPP1Q96AW1 172 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 FAM83DQ9H4H8 585 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 RC3H2Q9HBD1 1191 aaKnown RBP15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 METTL15A6NJ78 407 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 CLDN24A6NM45 220 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 TLL1O43897 1013 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 GCM2O75603 506 aaPredicted RBP15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 HSMCR30P0CW71 290 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 HLA-EP13747 358 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 PRPS1L1P21108 318 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 METAP1P53582 386 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 DOC2BQ14184 412 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 ZNF852Q6ZMS4 543 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 LRRC70Q7Z2Q7 622 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms