RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 OR2T29Q8NH02 315 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 DGCR14Q96DF8 476 aaKnown RBP13.99□□□□□ -0.17
TCOF1-202ENST00000377797 MRPL48Q96GC5 212 aaKnown RBP13.99□□□□□ -0.17
TCOF1-202ENST00000377797 CA14Q9ULX7 337 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 CD72P21854 359 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 MAGEA12P43365 314 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 RPA4Q13156 261 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 TPSD1Q9BZJ3 242 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 DUXAA6NLW8 204 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 CCNB2O95067 398 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 SEMA4FO95754 770 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 GANABQ14697 944 aaKnown RBP13.98□□□□□ -0.17
TCOF1-202ENST00000377797 ZNF423Q2M1K9 1284 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 CATSPEREQ5SY80 951 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 NFKBIDQ8NI38 313 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 PYURFQ96I23 114 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 ZNF347Q96SE7 839 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 RSL24D1Q9UHA3 163 aaKnown RBP13.98□□□□□ -0.17
TCOF1-202ENST00000377797 LRRC42Q9Y546 428 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 FEZF1A0PJY2 475 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 LHCGRP22888 699 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 PGDP52209 483 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 ADARP55265 1226 aaKnown RBP13.98□□□□□ -0.17
TCOF1-202ENST00000377797 TIMM50Q3ZCQ8 353 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 GPR153Q6NV75 609 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 METTL2BQ6P1Q9 378 aaKnown RBP13.98□□□□□ -0.17
TCOF1-202ENST00000377797 RNF44Q7L0R7 432 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 ASB16Q96NS5 453 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 P2RX2Q9UBL9 471 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 NME6O75414 186 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-202ENST00000377797 HIST1H2ABP04908 130 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 CFIP05156 583 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 GUCA1AP43080 201 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-202ENST00000377797 OR4D2P58180 307 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 C16orf72Q14CZ0 275 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 COQ5Q5HYK3 327 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 IER5LQ5T953 404 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 HIST3H2AQ7L7L0 130 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 SLC9B2Q86UD5 537 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 AMIGO1Q86WK6 493 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 HIST1H2ACQ93077 130 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 ARRDC3Q96B67 414 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 C6orf62Q9GZU0 229 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-202ENST00000377797 TMEM27Q9HBJ8 222 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 TAS2R9Q9NYW1 312 aa13.98□□□□□ -0.17
TCOF1-202ENST00000377797 PTBP2Q9UKA9 531 aaKnown RBP13.98□□□□□ -0.17
TCOF1-202ENST00000377797 NME4O00746 187 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 ARHGEF9O43307 516 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 SORBS2O94875 1100 aaKnown RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 HTR1EP28566 365 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 CDK3Q00526 305 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 ACVR1Q04771 509 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 LASP1Q14847 261 aaKnown RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 ATG9BQ674R7 924 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 DUS1LQ6P1R4 473 aaKnown RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 TMEM207Q6UWW9 146 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 RNF130Q86XS8 419 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 PACRGLQ8N7B6 248 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 VN1R2Q8NFZ6 395 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 RPLP0P6Q8NHW5 317 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 UTP4Q969X6 686 aaKnown RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 VMP1Q96GC9 406 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 HEBP1Q9NRV9 189 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 GPRC5BQ9NZH0 403 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 SCML1Q9UN30 329 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 ALPPL2P10696 532 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 PNCKQ6P2M8 343 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 NEK10Q6ZWH5 1172 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 ZBTB46Q86UZ6 589 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 FBXO15Q8NCQ5 510 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 RAB8BQ92930 207 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 NTMT1Q9BV86 223 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 THUMPD1Q9NXG2 353 aaKnown RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 TRIP11Q15643 1979 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 TRBC2A0A5B9 178 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 OR52A4PA6NMU1 304 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 GPX3P22352 226 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 MRPS15P82914 257 aaKnown RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 PAGE3Q5JUK9 113 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 ZNF852Q6ZMS4 543 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 AVL9Q8NBF6 648 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 SNRNP27Q8WVK2 155 aaKnown RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 NEIL2Q969S2 332 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 MRPL38Q96DV4 380 aaKnown RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 RSPH9Q9H1X1 276 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 PALMDQ9NP74 551 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 RHBDL2Q9NX52 303 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 PHF11Q9UIL8 331 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 E2F3O00716 465 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 H6PDO95479 791 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 PEX11BO96011 259 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 SAGP10523 405 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 AVPR1BP47901 424 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 PRLHRP49683 370 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 TRIM16LQ309B1 348 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 GRHL2Q6ISB3 625 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 GPR149Q86SP6 731 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 SLC30A8Q8IWU4 369 aa13.97□□□□□ -0.17
TCOF1-202ENST00000377797 ZCCHC7Q8N3Z6 543 aaKnown RBP13.97□□□□□ -0.17
TCOF1-202ENST00000377797 SHROOM3Q8TF72 1996 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms