RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 PRKD3O94806 890 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 ACPPP15309 386 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 AMD1P17707 334 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 CD27P26842 260 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 MMP12P39900 470 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 ELP6Q0PNE2 266 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 ZIK1Q3SY52 487 aaPredicted RBP14.96□□□□□ -0.01
CCDC40-202ENST00000374876 TMEM259Q4ZIN3 620 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 XKR6Q5GH73 641 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 LDLRAP1Q5SW96 308 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 PRAMEF9Q5VWM5 478 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 LIPJQ5W064 366 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 NOXRED1Q6NXP6 359 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 USP51Q70EK9 711 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 DPPA4Q7L190 304 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 GPR180Q86V85 440 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 C1orf216Q8TAB5 229 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 CXorf40AQ8TE69 158 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 BTN2A2Q8WVV5 523 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 GFM2Q969S9 779 aaKnown RBP14.96□□□□□ -0.01
CCDC40-202ENST00000374876 TMEM159Q96B96 161 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 SLC17A9Q9BYT1 436 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 NFKBIL1Q9UBC1 381 aaPredicted RBP14.96□□□□□ -0.01
CCDC40-202ENST00000374876 PPT2Q9UMR5 302 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 OTOGLQ3ZCN5 2332 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 SERTM1A2A2V5 107 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 TMEM202A6NGA9 273 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 TRIM64CA6NLI5 447 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 ARHGEF33A8MVX0 844 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 RFXANKO14593 260 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 UGDHO60701 494 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 CREG1O75629 220 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 ALPLP05186 524 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 SLC5A2P31639 672 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 CDK9P50750 372 aaKnown RBP14.95□□□□□ -0.02
CCDC40-202ENST00000374876 PLCL1Q15111 1095 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 NKG7Q16617 165 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 TMEM52BQ4KMG9 183 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 TCEAL6Q6IPX3 200 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 KIAA1161Q6NSJ0 714 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 FKBP9P1Q75LS8 142 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 GPR141Q7Z602 305 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 THOC6Q86W42 341 aaKnown RBP14.95□□□□□ -0.02
CCDC40-202ENST00000374876 CALHM3Q86XJ0 350 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 ATL1Q8WXF7 558 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 TCEAL3Q969E4 200 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 MED8Q96G25 268 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 EGLN2Q96KS0 407 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 FSCN3Q9NQT6 498 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 DCAF13Q9NV06 445 aaKnown RBP14.95□□□□□ -0.02
CCDC40-202ENST00000374876 DDX18Q9NVP1 670 aaKnown RBP14.95□□□□□ -0.02
CCDC40-202ENST00000374876 RIF1Q5UIP0 2472 aaKnown RBP14.95□□□□□ -0.02
CCDC40-202ENST00000374876 TRIM64A6NGJ6 449 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 PSIP1O75475 530 aaKnown RBP14.95□□□□□ -0.02
CCDC40-202ENST00000374876 HPRP00739 348 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 ELFN1P0C7U0 828 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 THRBP10828 461 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 PRPS1L1P21108 318 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 KIR3DL1P43629 444 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 CSTF3Q12996 717 aaKnown RBP14.95□□□□□ -0.02
CCDC40-202ENST00000374876 SGCGQ13326 291 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 ACOX1Q15067 660 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.95□□□□□ -0.02
CCDC40-202ENST00000374876 LIPIQ6XZB0 460 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 MSANTD1Q6ZTZ1 278 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 RASGRP3Q8IV61 690 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 SLC22A15Q8IZD6 547 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 RASGEF1AQ8N9B8 481 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 GLYATL1Q969I3 302 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 HIC2Q96JB3 615 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 SLC6A18Q96N87 628 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 C1QTNF2Q9BXJ5 285 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 EBPLQ9BY08 206 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 YTHDF1Q9BYJ9 559 aaKnown RBP14.95□□□□□ -0.02
CCDC40-202ENST00000374876 PARD6AQ9NPB6 346 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 PCDHGA5Q9Y5G8 931 aa14.95□□□□□ -0.02
CCDC40-202ENST00000374876 MAGED1Q9Y5V3 778 aaPredicted RBP14.95□□□□□ -0.02
CCDC40-202ENST00000374876 PI4KAP42356 2102 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 PLXNA2O75051 1894 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 BCAT2O15382 392 aaPredicted RBP14.94□□□□□ -0.02
CCDC40-202ENST00000374876 GFRA3O60609 400 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 TRMUO75648 421 aaKnown RBP14.94□□□□□ -0.02
CCDC40-202ENST00000374876 SERPINA1P01009 418 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 CATP04040 527 aaKnown RBP14.94□□□□□ -0.02
CCDC40-202ENST00000374876 C6P13671 934 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 CDKN2CP42773 168 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 PREPP48147 710 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 CSNK1EP49674 416 aaKnown RBP14.94□□□□□ -0.02
CCDC40-202ENST00000374876 ZNF33BQ06732 778 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 ABHD18Q0P651 414 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 PLA2G2CQ5R387 149 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 CCNYL2Q5T2Q4 361 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 OR4F3Q6IEY1 312 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 TECPR1Q7Z6L1 1165 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 RNF175Q8N4F7 328 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 NETO1Q8TDF5 533 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 ADAMTS16Q8TE57 1224 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 GLMNQ92990 594 aa14.94□□□□□ -0.02
CCDC40-202ENST00000374876 POP5Q969H6 163 aaKnown RBP14.94□□□□□ -0.02
CCDC40-202ENST00000374876 AP2M1Q96CW1 435 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms