RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 TCAF1Q9Y4C2 921 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PCDHGB1Q9Y5G3 927 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 BOLA2-SMG1P6H3BVE0 249 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 ZBTB22O15209 634 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 RNF13O43567 381 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 RP2O75695 350 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PGRP06401 933 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 C8GP07360 202 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 GNB3P16520 340 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CRISP1P54107 249 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 MLLT10P55197 1068 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 OR2B6P58173 313 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 RPS21P63220 83 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 IL10RBQ08334 325 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 SIM2Q14190 667 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 HEPACAMQ14CZ8 416 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 ARHGAP12Q8IWW6 846 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 RGMAQ96B86 450 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 LENG8Q96PV6 779 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 TTYH2Q9BSA4 534 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 HERC2P3Q9BVR0 1158 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 MKKSQ9NPJ1 570 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 OTOL1A6NHN0 477 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 A8MVJ9 347 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 TNFRSF11BO00300 401 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 SLC30A4O14863 429 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 TGFB1I1O43294 461 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 GJB5O95377 273 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PLATP00750 562 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PFKMP08237 780 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 ITGA5P08648 1049 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 GINS1Q14691 196 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 SLC9B1Q4ZJI4 515 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 TAS1R3Q7RTX0 852 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 TSEN2Q8NCE0 465 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 STK32AQ8WU08 396 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PBDC1Q9BVG4 233 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 MYNNQ9NPC7 610 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 FANCFQ9NPI8 374 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 NUDT15Q9NV35 164 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 GHRLQ9UBU3 117 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 C19orf25Q9UFG5 118 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PIK3C2AO00443 1686 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PAPSS2O95340 614 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 MT-CO2P00403 227 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 ANXA2P07355 339 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 GTF2F2P13984 249 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CLCQ05315 142 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 COL28A1Q2UY09 1125 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 TTMPQ5BVD1 217 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 SMIM15Q7Z3B0 74 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CAND1Q86VP6 1230 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PTCD3Q96EY7 689 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 SUSD3Q96L08 255 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CPEB1Q9BZB8 566 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CLK4Q9HAZ1 481 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PNPLA3Q9NST1 481 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 LIN7CQ9NUP9 197 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 HCFC1R1Q9NWW0 138 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 UBQLN2Q9UHD9 624 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 KCNS2Q9ULS6 477 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 NPIPA2E9PIF3 369 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 NPIPA3F8WFD2 350 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PCDH7O60245 1069 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 LEFTY1O75610 366 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 TIMP1P01033 207 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 IRF2P14316 349 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 DUSP3P51452 185 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 POLR2HP52434 150 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 KIAA1211LQ6NV74 962 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 SLC26A9Q7LBE3 791 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 KLHL6Q8WZ60 621 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CREB3L1Q96BA8 519 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 TRIM43Q96BQ3 446 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 ADAD1Q96M93 576 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 HSD17B14Q9BPX1 270 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 ORAI3Q9BRQ5 295 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 TMEM165Q9HC07 324 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 STARD5Q9NSY2 213 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 GPATCH2Q9NW75 528 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 GNG8Q9UK08 70 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PIAS3Q9Y6X2 628 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 FAM170BA6NMN3 283 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 NME6O75414 186 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 LATS1O95835 1130 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 GSTT2P0CG29 244 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 HTR2BP41595 481 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CDH12P55289 794 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 ADGRF1Q5T601 910 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 GALNT10Q86SR1 603 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 ZNF100Q8IYN0 542 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CD300LFQ8TDQ1 290 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 ITFG2Q969R8 447 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PIWIL1Q96J94 861 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 TMED9Q9BVK6 235 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 FBRSQ9HAH7 460 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 SORCS3Q9UPU3 1222 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 UPK3BL1B0FP48 263 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 FAM155AB1AL88 458 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms