RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 IFI44LQ53G44 452 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 LRRC73Q5JTD7 316 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 GCNT6Q5T4J0 391 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 CCDC80Q76M96 950 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 PLD3Q8IV08 490 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 DEPDC4Q8N2C3 294 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 KLHL23Q8NBE8 558 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 APH1BQ8WW43 257 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 GLYATL1Q969I3 302 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 TAMM41Q96BW9 452 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 LGALS12Q96DT0 336 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 PKP4Q99569 1192 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 REEP4Q9H6H4 257 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 ASAH2Q9NR71 780 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 THSD1Q9NS62 852 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 FKBP14Q9NWM8 211 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 DKK3Q9UBP4 350 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 OSGIN1Q9UJX0 560 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 RNF6Q9Y252 685 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 POFUT2Q9Y2G5 429 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 LYVE1Q9Y5Y7 322 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 A3GALT2U3KPV4 340 aa13.76□□□□□ -0.21
CD48-201ENST00000368045 ABHD14A-ACY1A0A1B0GW23 586 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 GNG14A0A1W2PPG7 69 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 FADS2P1A8MWK0 482 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 TMEM229AB2RXF0 380 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 NPC1O15118 1278 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 TNFRSF21O75509 655 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 ETHE1O95571 254 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 IFNA14P01570 189 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 NUDT7P0C024 238 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 ETV3P41162 512 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 ZNF763Q0D2J5 394 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 DGCR6Q14129 220 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 FBXO43Q4G163 708 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 TUBA3EQ6PEY2 450 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 LILRA6Q6PI73 481 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 AHSA2Q719I0 299 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 TECPR1Q7Z6L1 1165 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 KIAA0907Q7Z7F0 614 aaPredicted RBP13.75□□□□□ -0.21
CD48-201ENST00000368045 ADIPOR2Q86V24 386 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 NRSN1Q8IZ57 195 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 NAGSQ8N159 534 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 KIAA1958Q8N8K9 716 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 RASGEF1AQ8N9B8 481 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 OR52N2Q8NGI0 321 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 DNASE1L2Q92874 299 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 LRIG1Q96JA1 1093 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 DACH2Q96NX9 599 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 PSD2Q9BQI7 771 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 COPS4Q9BT78 406 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 EFCAB11Q9BUY7 163 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 BTBD2Q9BX70 525 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 ZBP1Q9H171 429 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 EHD1Q9H4M9 534 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 EPHX3Q9H6B9 360 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 TMEM38AQ9H6F2 299 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 GPBP1L1Q9HC44 474 aaPredicted RBP13.75□□□□□ -0.21
CD48-201ENST00000368045 RASSF1Q9NS23 344 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 NDUFAF4Q9P032 175 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 AASSQ9UDR5 926 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 PMF1-BGLAPU3KQ54 211 aa13.75□□□□□ -0.21
CD48-201ENST00000368045 TMEM202A6NGA9 273 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 TTC34A8MYJ7 566 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 EFCAB9A8MZ26 197 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 NEDD8-MDP1E9PL57 170 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 GCM2O75603 506 aaPredicted RBP13.74□□□□□ -0.21
CD48-201ENST00000368045 FGF19O95750 216 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 SLC16A8O95907 504 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 C8AP07357 584 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 BMP4P12644 408 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 POLR2EP19388 210 aaKnown RBP13.74□□□□□ -0.21
CD48-201ENST00000368045 XPAP23025 273 aaPredicted RBP13.74□□□□□ -0.21
CD48-201ENST00000368045 BDKRB1P46663 353 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 VASPP50552 380 aaPredicted RBP13.74□□□□□ -0.21
CD48-201ENST00000368045 RPS3AP61247 264 aaKnown RBP13.74□□□□□ -0.21
CD48-201ENST00000368045 PDE7AQ13946 482 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 CYP2A13Q16696 494 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 PAGE2BQ5JRK9 111 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.74□□□□□ -0.21
CD48-201ENST00000368045 SLC30A8Q8IWU4 369 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 DNAJC22Q8N4W6 341 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 OXR1Q8N573 874 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 DENND6BQ8NEG7 585 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 OR4C15Q8NGM1 316 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 RHOXF1Q8NHV9 184 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.74□□□□□ -0.21
CD48-201ENST00000368045 SPPL2AQ8TCT8 520 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 MTERF3Q96E29 417 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 ZHX1-C8orf76Q96EF9 292 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 TOX2Q96NM4 488 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 RAD9AQ99638 391 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 MYOCQ99972 504 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 SLIRPQ9GZT3 109 aaKnown RBP13.74□□□□□ -0.21
CD48-201ENST00000368045 TRNAU1APQ9NX07 287 aaKnown RBP13.74□□□□□ -0.21
CD48-201ENST00000368045 SH3BP4Q9P0V3 963 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 ENOPH1Q9UHY7 261 aa13.74□□□□□ -0.21
CD48-201ENST00000368045 KRBA1A5PL33 1030 aa13.73□□□□□ -0.21
CD48-201ENST00000368045 CLCA1A8K7I4 914 aa13.73□□□□□ -0.21
CD48-201ENST00000368045 TOR1BO14657 336 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms