RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CREBBPQ92793 2442 aa13.99□□□□□ -0.17
CTSD-202ENST00000367196 SCN3AQ9NY46 2000 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 MAGEB17A8MXT2 336 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 TSPAN12O95859 305 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 F10P00742 488 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 ALOX12P18054 663 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 AHRP35869 848 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 ARL4CP56559 192 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 MEF2AQ02078 507 aaPredicted RBP13.98□□□□□ -0.17
CTSD-202ENST00000367196 FRG1Q14331 258 aaKnown RBP13.98□□□□□ -0.17
CTSD-202ENST00000367196 MSS51Q4VC12 460 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 ZNF766Q5HY98 468 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 ACER2Q5QJU3 275 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 TEDDM1Q5T9Z0 273 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 H3F3CQ6NXT2 135 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 PAPD4Q6PIY7 484 aaKnown RBP13.98□□□□□ -0.17
CTSD-202ENST00000367196 TMEM207Q6UWW9 146 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 LURAP1LQ8IV03 231 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 LGI4Q8N135 537 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 AFAP1L2Q8N4X5 818 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 OR4K1Q8NGD4 311 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 SLC5A11Q8WWX8 675 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 TBC1D20Q96BZ9 403 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 PEX11GQ96HA9 241 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 PDLIM5Q96HC4 596 aaKnown RBP13.98□□□□□ -0.17
CTSD-202ENST00000367196 MACROD1Q9BQ69 325 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 UTP23Q9BRU9 249 aaKnown RBP13.98□□□□□ -0.17
CTSD-202ENST00000367196 CLK4Q9HAZ1 481 aaKnown RBP13.98□□□□□ -0.17
CTSD-202ENST00000367196 ZFATQ9P243 1243 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 ZFP69BQ9UJL9 534 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 CHMP2BQ9UQN3 213 aa13.98□□□□□ -0.17
CTSD-202ENST00000367196 CROCCQ5TZA2 2017 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 IGHV3-20A0A0C4DH32 117 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 ENO4A6NNW6 628 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 TTI1O43156 1089 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 HNRNPRO43390 633 aaKnown RBP13.97□□□□□ -0.17
CTSD-202ENST00000367196 LCMT2O60294 686 aaKnown RBP13.97□□□□□ -0.17
CTSD-202ENST00000367196 GALR3O60755 368 aaPredicted RBP13.97□□□□□ -0.17
CTSD-202ENST00000367196 ZG16O60844 167 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 BANF1O75531 89 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 UNC5CO95185 931 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 GUCA1CO95843 209 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 SERPIND1P05546 499 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 FHP07954 510 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 EFNA3P52797 238 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 KCNK10P57789 538 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 NAA30Q147X3 362 aaPredicted RBP13.97□□□□□ -0.17
CTSD-202ENST00000367196 SFT2D3Q587I9 215 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 C1QL3Q5VWW1 255 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 PDSS2Q86YH6 399 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 NKAPQ8N5F7 415 aaKnown RBP13.97□□□□□ -0.17
CTSD-202ENST00000367196 TMEM178AQ8NBL3 297 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 FAM98AQ8NCA5 519 aaKnown RBP13.97□□□□□ -0.17
CTSD-202ENST00000367196 ZNF740Q8NDX6 193 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 TRPV3Q8NET8 790 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 NT5CQ8TCD5 201 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 ANKRD7Q92527 254 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 PYCR2Q96C36 320 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 AIF1LQ9BQI0 150 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 PELI2Q9HAT8 420 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 NSMCE4AQ9NXX6 385 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 COPG2Q9UBF2 871 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 ENTPD4Q9Y227 616 aa13.97□□□□□ -0.17
CTSD-202ENST00000367196 TRGV8A0A0C4DH27 118 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 CDC123O75794 336 aaPredicted RBP13.96□□□□□ -0.17
CTSD-202ENST00000367196 CD46P15529 392 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 ZNF37AP17032 561 aaPredicted RBP13.96□□□□□ -0.17
CTSD-202ENST00000367196 EEF1DP29692 281 aaKnown RBP13.96□□□□□ -0.17
CTSD-202ENST00000367196 ELK3P41970 407 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 HNMTP50135 292 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 OR4D2P58180 307 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 DR1Q01658 176 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 RHAGQ02094 409 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 USP10Q14694 798 aaKnown RBP13.96□□□□□ -0.17
CTSD-202ENST00000367196 DEFB134Q4QY38 66 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 STEAP4Q687X5 459 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 RPTNQ6XPR3 784 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 TICAM1Q8IUC6 712 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 SPNS2Q8IVW8 549 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 BEST3Q8N1M1 668 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 ARMC2Q8NEN0 867 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 NEIL2Q969S2 332 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 VPS39Q96JC1 886 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 RBCK1Q9BYM8 510 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 KCNE2Q9Y6J6 123 aa13.96□□□□□ -0.17
CTSD-202ENST00000367196 ITPR2Q14571 2701 aa13.96□□□□□ -0.18
CTSD-202ENST00000367196 ZNF860A6NHJ4 632 aa13.95□□□□□ -0.18
CTSD-202ENST00000367196 PRSS44E7EML9 344 aa13.95□□□□□ -0.18
CTSD-202ENST00000367196 PSMD12O00232 456 aaPredicted RBP13.95□□□□□ -0.18
CTSD-202ENST00000367196 HPDP32754 393 aaPredicted RBP13.95□□□□□ -0.18
CTSD-202ENST00000367196 CA7P43166 264 aa13.95□□□□□ -0.18
CTSD-202ENST00000367196 SCTRP47872 440 aa13.95□□□□□ -0.18
CTSD-202ENST00000367196 SNRPNP63162 240 aaKnown RBP13.95□□□□□ -0.18
CTSD-202ENST00000367196 CDKL1Q00532 357 aa13.95□□□□□ -0.18
CTSD-202ENST00000367196 REEP5Q00765 189 aa13.95□□□□□ -0.18
CTSD-202ENST00000367196 MGAT5Q09328 741 aa13.95□□□□□ -0.18
CTSD-202ENST00000367196 TUBA3CQ13748 450 aa13.95□□□□□ -0.18
CTSD-202ENST00000367196 OR1C1Q15619 314 aa13.95□□□□□ -0.18
CTSD-202ENST00000367196 KRTCAP3Q53RY4 240 aa13.95□□□□□ -0.18
CTSD-202ENST00000367196 TUBA3EQ6PEY2 450 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms