RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 TRIM54Q9BYV2 358 aa7.71□□□□□ -1.18
RNU4-59P-201ENST00000364447 PPANQ9NQ55 473 aaKnown RBP7.71□□□□□ -1.18
RNU4-59P-201ENST00000364447 KLHL1Q9NR64 748 aa7.71□□□□□ -1.18
RNU4-59P-201ENST00000364447 ANKRD10Q9NXR5 420 aa7.71□□□□□ -1.18
RNU4-59P-201ENST00000364447 ARL15Q9NXU5 204 aa7.71□□□□□ -1.18
RNU4-59P-201ENST00000364447 ASIC3Q9UHC3 531 aa7.71□□□□□ -1.18
RNU4-59P-201ENST00000364447 PCDHGB6Q9Y5F9 930 aa7.71□□□□□ -1.18
RNU4-59P-201ENST00000364447 KLF2Q9Y5W3 355 aaPredicted RBP7.71□□□□□ -1.18
RNU4-59P-201ENST00000364447 SLC22A7Q9Y694 548 aa7.71□□□□□ -1.18
RNU4-59P-201ENST00000364447 GABRR3A8MPY1 467 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 MAGEB17A8MXT2 336 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 SLC16A5O15375 505 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 OR1F1O43749 312 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 LCMT2O60294 686 aaKnown RBP7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 ESRRAP11474 423 aaPredicted RBP7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 PRF1P14222 555 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 COX6B1P14854 86 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 CD46P15529 392 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 NPPBP16860 134 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 IL10P22301 178 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 FNTAP49354 379 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 CDKN2DP55273 166 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 AP1S2P56377 157 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 CCZ1BP86790 482 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 CCZ1P86791 482 aaPredicted RBP7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 MEF2AQ02078 507 aaPredicted RBP7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 RHAGQ02094 409 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 ALDH6A1Q02252 535 aaKnown RBP7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 RGS1Q08116 209 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 TUBA3CQ13748 450 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 USP10Q14694 798 aaKnown RBP7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 OR1C1Q15619 314 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 PHKG1Q16816 387 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 DEFB134Q4QY38 66 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 SPANXN3Q5MJ09 141 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 RBM20Q5T481 1227 aaKnown RBP7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 RNASEH2BQ5TBB1 312 aaKnown RBP7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 DUPD1Q68J44 220 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 NIPAL1Q6NVV3 410 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 H3F3CQ6NXT2 135 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 TUBA3EQ6PEY2 450 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 BNC2Q6ZN30 1099 aaPredicted RBP7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 KIAA0408Q6ZU52 694 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 ABHD13Q7L211 337 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 PCGF5Q86SE9 256 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 SHISA5Q8N114 240 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 GPATCH11Q8N954 259 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 MFSD9Q8NBP5 474 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 FAM98AQ8NCA5 519 aaKnown RBP7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 ZNF740Q8NDX6 193 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 MDS2Q8NDY4 140 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 ATL1Q8WXF7 558 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 PYCR2Q96C36 320 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 SIGLEC12Q96PQ1 595 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 NAT9Q9BTE0 207 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 TSPAN10Q9H1Z9 355 aaPredicted RBP7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 MMP25Q9NPA2 562 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 CHST11Q9NPF2 352 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 NEU2Q9Y3R4 380 aa7.7□□□□□ -1.18
RNU4-59P-201ENST00000364447 LRBAP50851 2863 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 TRBC2A0A5B9 178 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 PSMD12O00232 456 aaPredicted RBP7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 NDC80O14777 642 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 GALR3O60755 368 aaPredicted RBP7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 BANF1O75531 89 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 GUCA1CO95843 209 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 AHSGP02765 367 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 FHP07954 510 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 SNRPB2P08579 225 aaKnown RBP7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 ZNF888P0CJ79 500 aaPredicted RBP7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 ABOP16442 354 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 ALOX12P18054 663 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 ELAVL4P26378 380 aaKnown RBP7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 HTR1EP28566 365 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 GRNP28799 593 aaKnown RBP7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 PTGER4P35408 488 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 CD96P40200 585 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 ST13P50502 369 aaKnown RBP7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 SMSP52788 366 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 SLC26A5P58743 744 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 TIAL1Q01085 375 aaKnown RBP eCLIP7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 PWP1Q13610 501 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 CSHL1Q14406 222 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 BBS9Q3SYG4 887 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 KRTCAP3Q53RY4 240 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 SPINK14Q6IE38 97 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 XKRXQ6PP77 449 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 GDF7Q7Z4P5 450 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 CYP4X1Q8N118 509 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 LGI4Q8N135 537 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 PLPP5Q8NEB5 264 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 ABHD11Q8NFV4 315 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 OR5T3Q8NGG3 340 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 ACTRT1Q8TDG2 376 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 THAP3Q8WTV1 239 aaPredicted RBP7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 TSLPQ969D9 159 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 TBC1D20Q96BZ9 403 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 FBXL8Q96CD0 374 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 CERS2Q96G23 380 aa7.69□□□□□ -1.18
RNU4-59P-201ENST00000364447 SNF8Q96H20 258 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms