RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PTGER3P43115 390 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF460Q14592 562 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 PRAMEF18Q5VWM3 479 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 PSRC1Q6PGN9 363 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 ANKS1BQ7Z6G8 1248 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 HID1Q8IV36 788 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 C17orf62Q9BQA9 187 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 CHRAC1Q9NRG0 131 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 SLC35F4A4IF30 521 aa12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 IQCF5A8MTL0 148 aa12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 TXNL1O43396 289 aa12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 KCNJ5P48544 419 aa12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 ELP2Q6IA86 826 aa12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 SCML4Q8N228 414 aa12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 CERKQ8TCT0 537 aa12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 CIDECQ96AQ7 238 aaPredicted RBP12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 MALSU1Q96EH3 234 aa12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 GBA3Q9H227 469 aa12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 DPEP2Q9H4A9 486 aa12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 DUS2Q9NX74 493 aaKnown RBP12.83□□□□□ -0.35
SRGAP3-201ENST00000360413 RTCAO00442 366 aaKnown RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 IL32P24001 234 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 GSTM2P28161 218 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 NOMO3P69849 1222 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 GPR139Q6DWJ6 353 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 AMZ2Q86W34 360 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 YIPF7Q8N8F6 280 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 SAMD12Q8N8I0 201 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 ACTR6Q9GZN1 396 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 MAGEH1Q9H213 219 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC28A3Q9HAS3 691 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 KLF15Q9UIH9 416 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC7A11Q9UPY5 501 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 RPP14O95059 124 aaKnown RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 WDPCPO95876 746 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 EPHX1P07099 455 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 RAB4AP20338 218 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 CD47Q08722 323 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 CLCA4Q14CN2 919 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 DECR1Q16698 335 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 LRRC55Q6ZSA7 311 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 SHKBP1Q8TBC3 707 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 RTFDC1Q9BY42 306 aaPredicted RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 GNG13Q9P2W3 67 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 ZNF670-ZNF695F2Z2N8 137 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 TGM6O95932 706 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 HCKP08631 526 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 AGTR1P30556 359 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 ALDH3B1P43353 468 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 RIDAP52758 137 aaKnown RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 SCARB2Q14108 478 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 TMPPEQ6ZT21 453 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 BEND4Q6ZU67 534 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 OR6C4Q8NGE1 309 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 TRUB1Q8WWH5 349 aaKnown RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 GPR21Q99679 349 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 C1orf21Q9H246 121 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 IRAK2O43187 625 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 SCAF4O95104 1147 aaKnown RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 PCCBP05166 539 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 ANKRD54Q6NXT1 300 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC9A9Q8IVB4 645 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 ARL14Q8N4G2 192 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 ORAI3Q9BRQ5 295 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 OSER1Q9NX31 292 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 ERVK13-1Q9NX77 482 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 GFOD1Q9NXC2 390 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 ASCC3Q8N3C0 2202 aaKnown RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 MAGI3Q5TCQ9 1506 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 FTCDNL1E5RQL4 147 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 IL33O95760 270 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 CREB1P16220 341 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 DPEP1P16444 411 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 DSC3Q14574 896 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 NOMO1Q15155 1222 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 INTS6LQ5JSJ4 861 aaKnown RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 NXPE1Q8N323 547 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 GATA5Q9BWX5 397 aaPredicted RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 MRM3Q9HC36 420 aaKnown RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 GNG8Q9UK08 70 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 ESR1P03372 595 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 NDST2P52849 883 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 ZNF550Q7Z398 422 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 BEST3Q8N1M1 668 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 C2orf73Q8N5S3 287 aaPredicted RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 TMEM234Q8WY98 164 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 BRF2Q9HAW0 419 aa12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 NUFIP1Q9UHK0 495 aaKnown RBP12.83□□□□□ -0.36
SRGAP3-201ENST00000360413 KIF1AQ12756 1690 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 PRRC2BQ5JSZ5 2229 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 TCRBV7S2A1N4TA0A589 114 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 A8MVJ9 347 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 H7C417 338 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 EIF1AYO14602 144 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 CDK2P24941 298 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 BMP8BP34820 402 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 EIF1AXP47813 144 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 RAB5CP51148 216 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 HSD11B2P80365 405 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 BMP8AQ7Z5Y6 402 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms