RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 CFAP157Q5JU67 520 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 KLHL35Q6PF15 583 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 RBM44Q6ZP01 1051 aaKnown RBP3.84□□□□□ -1.8
LIG4-201ENST00000356922 RNF44Q7L0R7 432 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 RAB11FIP2Q7L804 512 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 PRSS42Q7Z5A4 293 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 WDR75Q8IWA0 830 aaKnown RBP3.84□□□□□ -1.8
LIG4-201ENST00000356922 WDR48Q8TAF3 677 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 SLC13A3Q8WWT9 602 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 ADAMTS14Q8WXS8 1223 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 PTCD3Q96EY7 689 aaKnown RBP3.84□□□□□ -1.8
LIG4-201ENST00000356922 C11orf24Q96F05 449 aaPredicted RBP3.84□□□□□ -1.8
LIG4-201ENST00000356922 APIPQ96GX9 242 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 ZNF285Q96NJ3 590 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 OR52B2Q96RD2 323 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 SARGQ9BW04 601 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 SCNM1Q9BWG6 230 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 NUF2Q9BZD4 464 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 SPRY4Q9C004 299 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 TMEM184CQ9NVA4 438 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 SOHLH2Q9NX45 425 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 MAU2Q9Y6X3 613 aa3.84□□□□□ -1.8
LIG4-201ENST00000356922 MYOCOSA0A1B0GUC4 107 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 FAM227AF5H4B4 570 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 H0YIV9 168 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 MANBAO00462 879 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 NDUFS4O43181 175 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 ZNF749O43361 778 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 NPHS1O60500 1241 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 PCNAP12004 261 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 IL1RNP18510 177 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 OR1D4P47884 311 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 INHBCP55103 352 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 RAE1P78406 368 aaKnown RBP3.83□□□□□ -1.8
LIG4-201ENST00000356922 REEP5Q00765 189 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 TBL3Q12788 808 aaKnown RBP3.83□□□□□ -1.8
LIG4-201ENST00000356922 ERV3-1Q14264 604 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 PDCD2Q16342 344 aaPredicted RBP3.83□□□□□ -1.8
LIG4-201ENST00000356922 C1orf189Q5VU69 101 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 KANK2Q63ZY3 851 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 GRHL2Q6ISB3 625 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 TMPRSS7Q7RTY8 843 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 LAPTM4BQ86VI4 370 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 TCAIMQ8N3R3 496 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 TMEM52Q8NDY8 209 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 FAM76AQ8TAV0 307 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 USP7Q93009 1102 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 SLC22A18Q96BI1 424 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 TCTN2Q96GX1 697 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 ZFYVE21Q9BQ24 234 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 HAUS8Q9BT25 410 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 RAB11FIP5Q9BXF6 653 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 PDE7BQ9NP56 450 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 PRDM7Q9NQW5 492 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 BAIAP2L1Q9UHR4 511 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 ZFP69BQ9UJL9 534 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 SNX7Q9UNH6 387 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 EXO1Q9UQ84 846 aaKnown RBP3.83□□□□□ -1.8
LIG4-201ENST00000356922 ERVK-11Q9UQG0 969 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 C9JVG2 144 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 MASP2O00187 686 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 MATN2O00339 956 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 PLPP1O14494 284 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 KLF11O14901 512 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 AZIN1O14977 448 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 FOXD2O60548 495 aaPredicted RBP3.83□□□□□ -1.8
LIG4-201ENST00000356922 EDF1O60869 148 aaKnown RBP3.83□□□□□ -1.8
LIG4-201ENST00000356922 RSL1D1O76021 490 aaKnown RBP3.83□□□□□ -1.8
LIG4-201ENST00000356922 OTCP00480 354 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 C1QCP02747 245 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 ANKRD34CP0C6C1 535 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 F8A1P23610 371 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 CCND1P24385 295 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 CCKBRP32239 447 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 HNRNPFP52597 415 aaKnown RBP3.83□□□□□ -1.8
LIG4-201ENST00000356922 MAPK10P53779 464 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 DIO3P55073 304 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 GALNT1Q10472 559 aaPredicted RBP3.83□□□□□ -1.8
LIG4-201ENST00000356922 FOXC1Q12948 553 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 TUBB3Q13509 450 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 PRTGQ2VWP7 1150 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 LIPJQ5W064 366 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 FRG2Q64ET8 278 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 OR9A4Q8NGU2 314 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 ZCCHC10Q8TBK6 192 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 CCT6BQ92526 530 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 PCSK5Q92824 1860 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 MS4A6EQ96DS6 147 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 TEX37Q96LM6 180 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 MAGEB18Q96M61 343 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 FRG2BQ96QU4 278 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 C17orf62Q9BQA9 187 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 RHBGQ9H310 441 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 EHD1Q9H4M9 534 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 THAP1Q9NVV9 213 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 PISDQ9UG56 409 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 HAO1Q9UJM8 370 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 DCTN4Q9UJW0 460 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 PTPRQQ9UMZ3 2332 aa3.83□□□□□ -1.8
LIG4-201ENST00000356922 DLGAP4Q9Y2H0 992 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms