RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ASF1BQ9NVP2 202 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 HCN3Q9P1Z3 774 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 TXNDC16Q9P2K2 825 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 DMGDHQ9UI17 866 aaKnown RBP13.65□□□□□ -0.22
HMGN3-202ENST00000344726 MKL2Q9ULH7 1088 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 VPS4AQ9UN37 437 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 PCDHGA10Q9Y5H3 936 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 ZGRF1Q86YA3 2104 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 IGHV1-45A0A0A0MS14 117 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 ZNF860A6NHJ4 632 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 NCF1BA6NI72 391 aaPredicted RBP13.64□□□□□ -0.23
HMGN3-202ENST00000344726 NCF1CA8MVU1 366 aaPredicted RBP13.64□□□□□ -0.23
HMGN3-202ENST00000344726 NDUFS4O43181 175 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 DNAJB6O75190 326 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 SEMA7AO75326 666 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 RDH16O75452 317 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 HPP00738 406 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 HEXBP07686 556 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 CELA2AP08217 269 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 SLC35G6P0C7Q6 338 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 NCF1P14598 390 aaPredicted RBP13.64□□□□□ -0.23
HMGN3-202ENST00000344726 STMN1P16949 149 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 VARSP26640 1264 aaKnown RBP13.64□□□□□ -0.23
HMGN3-202ENST00000344726 KCNC1P48547 511 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 RAB10P61026 200 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 ILF2Q12905 390 aaKnown RBP13.64□□□□□ -0.23
HMGN3-202ENST00000344726 DLG1Q12959 904 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 FBXO48Q5FWF7 155 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 GRTP1Q5TC63 336 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 TMEM205Q6UW68 189 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 NXPE4Q6UWF7 544 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 NDUFAF7Q7L592 441 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 CMC1Q7Z7K0 106 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 TMPRSS11BQ86T26 416 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 MMGT1Q8N4V1 131 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 AFAP1L2Q8N4X5 818 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 CISD2Q8N5K1 135 aaKnown RBP13.64□□□□□ -0.23
HMGN3-202ENST00000344726 OR51Q1Q8NH59 317 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 ZNF592Q92610 1267 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 THOC3Q96J01 351 aaKnown RBP13.64□□□□□ -0.23
HMGN3-202ENST00000344726 UBXN10Q96LJ8 280 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 PSMG3-AS1Q96PY0 264 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 FAM129AQ9BZQ8 928 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 VN1R1Q9GZP7 353 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 AICDAQ9GZX7 198 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 LHPPQ9H008 270 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 PELI2Q9HAT8 420 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 ANKHQ9HCJ1 492 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 ZFP69BQ9UJL9 534 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 NAALAD2Q9Y3Q0 740 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 DYRK1BQ9Y463 629 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 SLC22A7Q9Y694 548 aa13.64□□□□□ -0.23
HMGN3-202ENST00000344726 SPTAN1Q13813 2472 aaKnown RBP13.64□□□□□ -0.23
HMGN3-202ENST00000344726 LOC102723996A0A087X1L8 192 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 BLACEA4D250 179 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 C4orf51C9J302 202 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 KLHL18O94889 574 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 WDR47O94967 919 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 SLC35E2BP0CK96 405 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 STX2P32856 288 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 SPRP35270 261 aaPredicted RBP13.63□□□□□ -0.23
HMGN3-202ENST00000344726 XCR1P46094 333 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 HNMTP50135 292 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 HYAL2Q12891 473 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 PWP1Q13610 501 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 PCOLCEQ15113 449 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 LANCL3Q6ZV70 420 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 IQCKQ8N0W5 287 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 ZADH2Q8N4Q0 377 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 OR5T3Q8NGG3 340 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 NT5CQ8TCD5 201 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 PSMF1Q92530 271 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 ESAMQ96AP7 390 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 BARD1Q99728 777 aaKnown RBP13.63□□□□□ -0.23
HMGN3-202ENST00000344726 WDR77Q9BQA1 342 aaPredicted RBP13.63□□□□□ -0.23
HMGN3-202ENST00000344726 ILKAPQ9H0C8 392 aaPredicted RBP13.63□□□□□ -0.23
HMGN3-202ENST00000344726 MAP10Q9P2G4 905 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 KCNE2Q9Y6J6 123 aa13.63□□□□□ -0.23
HMGN3-202ENST00000344726 NSG1A0A0A6YYJ2 146 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 HMX2A2RU54 273 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 KLHL41O60662 606 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 GALR3O60755 368 aaPredicted RBP13.62□□□□□ -0.23
HMGN3-202ENST00000344726 PRAMEF4O60810 478 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 IPO13O94829 963 aaKnown RBP13.62□□□□□ -0.23
HMGN3-202ENST00000344726 SERPIND1P05546 499 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 PRR35P0CG20 571 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 ZNF888P0CJ79 500 aaPredicted RBP13.62□□□□□ -0.23
HMGN3-202ENST00000344726 CXCR2P25025 360 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 SOX11P35716 441 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 AHRP35869 848 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 GGT5P36269 586 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 ATP6V0D1P61421 351 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 OLR1P78380 273 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 SLMAPQ14BN4 828 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 NR6A1Q15406 480 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 EIF2S3LQ2VIR3 472 aaKnown RBP13.62□□□□□ -0.23
HMGN3-202ENST00000344726 MINDY4Q4G0A6 757 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 DEFB134Q4QY38 66 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 AGAP7PQ5VUJ5 663 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 PRAMEF9Q5VWM5 478 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms