RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 COPG2Q9UBF2 871 aa18.94■□□□□ 0.62
CEACAM3-201ENST00000344550 IKZF3Q9UKT9 509 aa18.94■□□□□ 0.62
CEACAM3-201ENST00000344550 MTO1Q9Y2Z2 717 aaKnown RBP18.94■□□□□ 0.62
CEACAM3-201ENST00000344550 HECTD1Q9ULT8 2610 aa18.94■□□□□ 0.62
CEACAM3-201ENST00000344550 RELNP78509 3460 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 NPEPPSL1A6NEC2 478 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 CXorf49A8MYA2 514 aaPredicted RBP18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 MASP2O00187 686 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 CDK2AP1O14519 115 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 GALR3O60755 368 aaPredicted RBP18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 H2AFYO75367 372 aaKnown RBP18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 SERPINA6P08185 405 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 MYBL2P10244 700 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 JAK1P23458 1154 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 SOX11P35716 441 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 GPX6P59796 221 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 RAB10P61026 200 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 MAT1AQ00266 395 aaKnown RBP18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 PCOLCEQ15113 449 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 SYT16Q17RD7 645 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 WHAMMP3Q1A5X7 153 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 CATSPEREQ5SY80 951 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 SULT1C3Q6IMI6 304 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 ZNF740Q8NDX6 193 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 DNAJB14Q8TBM8 379 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 PSMF1Q92530 271 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 HAS2Q92819 552 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 SLC6A16Q9GZN6 736 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 NT5DC2Q9H857 520 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 ZBTB20Q9HC78 741 aaPredicted RBP18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 LRRC4CQ9HCJ2 640 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 TEKT2Q9UIF3 430 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 NAALAD2Q9Y3Q0 740 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 COPG1Q9Y678 874 aaKnown RBP18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 SHANK1Q9Y566 2161 aa18.93■□□□□ 0.62
CEACAM3-201ENST00000344550 DYTNA2CJ06 578 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 SGK494L7N484 410 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 WFS1O76024 890 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 CCDC166P0CW27 439 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 CRABP2P29373 138 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 GUCY2DQ02846 1103 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 ZNF460Q14592 562 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 ZNF169Q14929 603 aaPredicted RBP18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 MINDY4Q4G0A6 757 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 FHL5Q5TD97 284 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 PLAG1Q6DJT9 500 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 ZDHHC24Q6UX98 284 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 CAPN12Q6ZSI9 719 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 PRSS41Q7RTY9 318 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 CPEB2Q7Z5Q1 589 aaKnown RBP18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 CUZD1Q86UP6 607 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 PDSS2Q86YH6 399 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 GPSM1Q86YR5 675 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 C17orf53Q8N3J3 647 aaPredicted RBP18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 KIAA1191Q96A73 305 aa18.92■□□□□ 0.62
CEACAM3-201ENST00000344550 USP9XQ93008 2570 aaPredicted RBP18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 ESPL1Q14674 2120 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 MAGEB17A8MXT2 336 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 TCP11X1B4DZS4 312 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 FFAR3O14843 346 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 GPR42O15529 346 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 C1GALT1C1LP0DN25 315 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 CD1DP15813 335 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 CDC16Q13042 620 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 INAQ16352 499 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 EXT1Q16394 746 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 KBTBD12Q3ZCT8 623 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 C8orf74Q6P047 294 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 SLCO4C1Q6ZQN7 724 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 TMPRSS11BQ86T26 416 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 RELL1Q8IUW5 271 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 CTAGE3PQ8IX95 158 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 KRT78Q8N1N4 520 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 ZCCHC10Q8TBK6 192 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 TBC1D20Q96BZ9 403 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 TSNARE1Q96NA8 513 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 MACROD1Q9BQ69 325 aa18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 SPENQ96T58 3664 aaKnown RBP18.91■□□□□ 0.62
CEACAM3-201ENST00000344550 RDH16O75452 317 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 WDR47O94967 919 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 SMIM10L1P0DMW3 83 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 GNLYP22749 145 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 STXBP1P61764 594 aaKnown RBP18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 EEF1A2Q05639 463 aaKnown RBP18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 TMIGD1Q6UXZ0 262 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 CCDC25Q86WR0 208 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 CISD2Q8N5K1 135 aaKnown RBP18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 ANKRD53Q8N9V6 530 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 PDPRQ8NCN5 879 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 MNS1Q8NEH6 495 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 STAG3L4Q8TBR4 150 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 BRIX1Q8TDN6 353 aaKnown RBP18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 UTP15Q8TED0 518 aaKnown RBP18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 SMIM10Q96HG1 83 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 MESP1Q9BRJ9 268 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 NMRAL1Q9HBL8 299 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 ASF1BQ9NVP2 202 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 LUZP4Q9P127 313 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 HCN3Q9P1Z3 774 aa18.9■□□□□ 0.62
CEACAM3-201ENST00000344550 DOPEY2Q9Y3R5 2298 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms