RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 ZNF232Q9UNY5 417 aa23.14■■□□□ 1.29
NELFB-201ENST00000343053 LYVE1Q9Y5Y7 322 aa23.14■■□□□ 1.29
NELFB-201ENST00000343053 SGTAO43765 313 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 RFPL2O75678 378 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 EFEMP2O95967 443 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 RPS13P62277 151 aaKnown RBP23.13■■□□□ 1.29
NELFB-201ENST00000343053 MEF2AQ02078 507 aaPredicted RBP23.13■■□□□ 1.29
NELFB-201ENST00000343053 SYTL3Q4VX76 610 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 TMPRSS11BQ86T26 416 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 HUS1BQ8NHY5 278 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 ECHDC3Q96DC8 303 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 NDUFAF4Q9P032 175 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 SCHIP1Q9P0W5 487 aaPredicted RBP23.13■■□□□ 1.29
NELFB-201ENST00000343053 RHCGQ9UBD6 479 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 DNTTP04053 509 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 PPIGQ13427 754 aaKnown RBP eCLIP23.13■■□□□ 1.297e-8■■■□□ 16.9
NELFB-201ENST00000343053 MPPE1Q53F39 396 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 ZNF366Q8N895 744 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 FIBINQ8TAL6 211 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 GTPBP3Q969Y2 492 aaKnown RBP23.13■■□□□ 1.29
NELFB-201ENST00000343053 TBC1D20Q96BZ9 403 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 HRASLS5Q96KN8 279 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 OR51E2Q9H255 320 aa23.13■■□□□ 1.29
NELFB-201ENST00000343053 FADS2P1A8MWK0 482 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 CNOT3O75175 753 aaKnown RBP23.12■■□□□ 1.29
NELFB-201ENST00000343053 MYO1DO94832 1006 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 CSNK1DP48730 415 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 TPGS2Q68CL5 300 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 OR10G2Q8NGC3 310 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 SLC38A4Q969I6 547 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 PITX2Q99697 317 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 TCF25Q9BQ70 676 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 RIOK2Q9BVS4 552 aaKnown RBP23.12■■□□□ 1.29
NELFB-201ENST00000343053 GPATCH2Q9NW75 528 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 SPATA6Q9NWH7 488 aaPredicted RBP23.12■■□□□ 1.29
NELFB-201ENST00000343053 STOX2Q9P2F5 926 aaPredicted RBP23.12■■□□□ 1.29
NELFB-201ENST00000343053 SH2B3Q9UQQ2 575 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 C1orf226A1L170 272 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 NEDD8-MDP1E9PL57 170 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 LATS1O95835 1130 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 PDHA2P29803 388 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 EXOC3L2Q2M3D2 409 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 MCCC1Q96RQ3 725 aaPredicted RBP23.12■■□□□ 1.29
NELFB-201ENST00000343053 CHST8Q9H2A9 424 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 MAP4K5Q9Y4K4 846 aa23.12■■□□□ 1.29
NELFB-201ENST00000343053 PTHP01270 115 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 TPTEP56180 551 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 HBA1P69905 142 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 CSTF3Q12996 717 aaKnown RBP23.11■■□□□ 1.29
NELFB-201ENST00000343053 CDKL4Q5MAI5 379 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 MSANTD1Q6ZTZ1 278 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 TMEM25Q86YD3 366 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 CLIP4Q8N3C7 705 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 NFKBIDQ8NI38 313 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 MRPS31Q92665 395 aaKnown RBP23.11■■□□□ 1.29
NELFB-201ENST00000343053 GGHQ92820 318 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 Q96MT0 163 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 SIGLEC11Q96RL6 698 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 CHCHD6Q9BRQ6 235 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 DOHHQ9BU89 302 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 PRAMEF25A6NGN4 478 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 FAM227AF5H4B4 570 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 TLL1O43897 1013 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 C6orf47O95873 294 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 MPC1LP0DKB6 136 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 IDSP22304 550 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 EIF2DP41214 584 aaKnown RBP23.11■■□□□ 1.29
NELFB-201ENST00000343053 AP1S2P56377 157 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 PLEKHS1Q5SXH7 462 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 SYTL1Q8IYJ3 562 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 OR7G3Q8NG95 312 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 RHOXF1Q8NHV9 184 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 ASZ1Q8WWH4 475 aa23.11■■□□□ 1.29
NELFB-201ENST00000343053 OLFM2O95897 454 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 URODP06132 367 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 WEE1P30291 646 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 ZNF404Q494X3 552 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 LIPJQ5W064 366 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 LGI4Q8N135 537 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 CACTIN-AS1Q8N1I8 211 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 NEIL2Q969S2 332 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 FCRL1Q96LA6 429 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 FAM83DQ9H4H8 585 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 EXO1Q9UQ84 846 aaKnown RBP23.1■■□□□ 1.29
NELFB-201ENST00000343053 PCDHGB3Q9Y5G1 929 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 GRK3P35626 688 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 PGBD3Q8N328 593 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 C11orf65Q8NCR3 313 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 CYB5D2Q8WUJ1 264 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 IPCEF1Q8WWN9 437 aaPredicted RBP23.1■■□□□ 1.29
NELFB-201ENST00000343053 CLP1Q92989 425 aaKnown RBP23.1■■□□□ 1.29
NELFB-201ENST00000343053 EPYCQ99645 322 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 BCL7BQ9BQE9 202 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 PSORS1C1Q9UIG5 152 aa23.1■■□□□ 1.29
NELFB-201ENST00000343053 LEFTY2O00292 366 aa23.09■■□□□ 1.29
NELFB-201ENST00000343053 TEX28O15482 410 aa23.09■■□□□ 1.29
NELFB-201ENST00000343053 DLGAP3O95886 979 aa23.09■■□□□ 1.29
NELFB-201ENST00000343053 CTSKP43235 329 aa23.09■■□□□ 1.29
NELFB-201ENST00000343053 VEZF1Q14119 521 aa23.09■■□□□ 1.29
NELFB-201ENST00000343053 UBE2UQ5VVX9 321 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms