RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 MSANTD2Q6P1R3 559 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 SFRP1Q8N474 314 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 C5orf34Q96MH7 638 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 NUAK2Q9H093 628 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 C14orf105Q9NVL8 296 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 XPR1Q9UBH6 696 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 NPFFR2Q9Y5X5 522 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 DNMT3AQ9Y6K1 912 aaPredicted RBP16.39■□□□□ 0.21
CDK11B-201ENST00000340677 METTL15A6NJ78 407 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 SAC3D1A6NKF1 404 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 MATN3O15232 486 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 FGF4P08620 206 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 PAICSP22234 425 aaKnown RBP16.39■□□□□ 0.21
CDK11B-201ENST00000340677 GRK4P32298 578 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 NUDT6P53370 316 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 GPC5P78333 572 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 LUZP2Q86TE4 346 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 LRRC52Q8N7C0 313 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 PEX11GQ96HA9 241 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 DPH7Q9BTV6 452 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 DUSP15Q9H1R2 295 aaPredicted RBP16.39■□□□□ 0.21
CDK11B-201ENST00000340677 FAM83DQ9H4H8 585 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 GAREM1Q9H706 876 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 ANKHQ9HCJ1 492 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 NECTIN3Q9NQS3 549 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 OGDHLQ9ULD0 1010 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 RNF24Q9Y225 148 aa16.39■□□□□ 0.21
CDK11B-201ENST00000340677 SCAF4O95104 1147 aaKnown RBP16.38■□□□□ 0.21
CDK11B-201ENST00000340677 PCDH8O95206 1070 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 RAF1P04049 648 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 NUDT7P0C024 238 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 DHRS4L1P0CG22 281 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 UNGP13051 313 aaPredicted RBP16.38■□□□□ 0.21
CDK11B-201ENST00000340677 RFX2P48378 723 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 GAD2Q05329 585 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 FOXO1Q12778 655 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 EXOSC2Q13868 293 aaKnown RBP16.38■□□□□ 0.21
CDK11B-201ENST00000340677 GRIN2CQ14957 1233 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 LHX8Q68G74 356 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 TMEM270Q6UE05 265 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 NAPRTQ6XQN6 538 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 C16orf59Q7L2K0 433 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 SLC22A17Q8WUG5 538 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 ELMO3Q96BJ8 720 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 KIF12Q96FN5 646 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 FAM118BQ9BPY3 351 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 HEXA-AS1Q9H8Q6 139 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 PRDM5Q9NQX1 630 aaPredicted RBP16.38■□□□□ 0.21
CDK11B-201ENST00000340677 CISHQ9NSE2 258 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 SH3BP4Q9P0V3 963 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 PRPF19Q9UMS4 504 aaKnown RBP16.38■□□□□ 0.21
CDK11B-201ENST00000340677 UBQLN1Q9UMX0 589 aaKnown RBP16.38■□□□□ 0.21
CDK11B-201ENST00000340677 A0A0U1RQV5 110 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 J3KRW8 73 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 SULT1C2O00338 296 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 STX16O14662 325 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 BCAS2O75934 225 aaPredicted RBP16.38■□□□□ 0.21
CDK11B-201ENST00000340677 GADD45GO95257 159 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 OTCP00480 354 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 CCR7P32248 378 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 PCGF2P35227 344 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 RNF212Q495C1 297 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 FAM183BPQ6ZVS7 135 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 MINDY1Q8N5J2 469 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 CYGBQ8WWM9 190 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 HDAC10Q969S8 669 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 CARS2Q9HA77 564 aaKnown RBP16.38■□□□□ 0.21
CDK11B-201ENST00000340677 PAK1IP1Q9NWT1 392 aaPredicted RBP16.38■□□□□ 0.21
CDK11B-201ENST00000340677 TANC1Q9C0D5 1861 aa16.38■□□□□ 0.21
CDK11B-201ENST00000340677 GPR182O15218 404 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 ADAM12O43184 909 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 TXNL1O43396 289 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 RFPL3O75679 317 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 RECQL4O94761 1208 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 LSM8O95777 96 aaKnown RBP16.37■□□□□ 0.21
CDK11B-201ENST00000340677 OPN1MWP04001 364 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 HOXC4P09017 264 aaPredicted RBP16.37■□□□□ 0.21
CDK11B-201ENST00000340677 OPN1MW2P0DN77 364 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 OPN1MW3P0DN78 364 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 SPP1P10451 314 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 GNA15P30679 374 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 MAP2K4P45985 399 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 PSMD8P48556 350 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 DHPSP49366 369 aaPredicted RBP16.37■□□□□ 0.21
CDK11B-201ENST00000340677 KRTCAP3Q53RY4 240 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 RASSF6Q6ZTQ3 369 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 PRSS48Q7RTY5 328 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 TMEM199Q8N511 208 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 OR5M1Q8NGP8 315 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 UBASH3BQ8TF42 649 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 PPWD1Q96BP3 646 aaKnown RBP16.37■□□□□ 0.21
CDK11B-201ENST00000340677 PPP3R2Q96LZ3 170 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 COL21A1Q96P44 957 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 HBEGFQ99075 208 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 NOL11Q9H8H0 719 aaKnown RBP16.37■□□□□ 0.21
CDK11B-201ENST00000340677 CHST7Q9NS84 486 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 OPTCQ9UBM4 332 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 CA5BQ9Y2D0 317 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 SCN1AP35498 2009 aa16.37■□□□□ 0.21
CDK11B-201ENST00000340677 MICAL3Q7RTP6 2002 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms