RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 MS4A2Q01362 244 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 XKR4Q5GH76 650 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 ISCA2Q86U28 154 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 ANKFN1Q8N957 763 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 ZBTB8BQ8NAP8 495 aaPredicted RBP13.31□□□□□ -0.28
RTN4-202ENST00000337526 ERMAPQ96PL5 475 aaPredicted RBP13.31□□□□□ -0.28
RTN4-202ENST00000337526 TMEM175Q9BSA9 504 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 TMED9Q9BVK6 235 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 BHLHE41Q9C0J9 482 aaPredicted RBP13.31□□□□□ -0.28
RTN4-202ENST00000337526 BAIAP2Q9UQB8 552 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 MYO18AQ92614 2054 aaKnown RBP13.31□□□□□ -0.28
RTN4-202ENST00000337526 DNAJB5O75953 348 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 STT3AP46977 705 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 TLE2Q04725 743 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 SP140Q13342 867 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 LASP1Q14847 261 aaKnown RBP13.31□□□□□ -0.28
RTN4-202ENST00000337526 PSAPL1Q6NUJ1 521 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 SLITRK4Q8IW52 837 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 PRSS58Q8IYP2 241 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 ZNF676Q8N7Q3 588 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 NCSTNQ92542 709 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 SCAMP4Q969E2 229 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 TDP1Q9NUW8 608 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 TBCCD1Q9NVR7 557 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 NDUFS4O43181 175 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 EEDO75530 441 aaKnown RBP13.31□□□□□ -0.28
RTN4-202ENST00000337526 AGR2O95994 175 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 ZNF8P17098 575 aaPredicted RBP13.31□□□□□ -0.28
RTN4-202ENST00000337526 ARCN1P48444 511 aaKnown RBP13.31□□□□□ -0.28
RTN4-202ENST00000337526 PAMR1Q6UXH9 720 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 RANBP10Q6VN20 620 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 IFNL1Q8IU54 200 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 RANBP9Q96S59 729 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 TIGARQ9NQ88 270 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 PRMT3O60678 531 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 RCBTB2O95199 551 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 PEPDP12955 493 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 ZNF823P16415 610 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 HOXA11P31270 313 aaPredicted RBP13.3□□□□□ -0.28
RTN4-202ENST00000337526 SEC13P55735 322 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 RAB8AP61006 207 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 RPP38P78345 283 aaKnown RBP13.3□□□□□ -0.28
RTN4-202ENST00000337526 CMPK2Q5EBM0 449 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 ZCCHC12Q6PEW1 402 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
RTN4-202ENST00000337526 TOMM5Q8N4H5 51 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 OR10T2Q8NGX3 314 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 LGALS12Q96DT0 336 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 TMEM80Q96HE8 168 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 UCKL1Q9NWZ5 548 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 UPB1Q9UBR1 384 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 PCDHGB1Q9Y5G3 927 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 SOCS2O14508 198 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 CPNE3O75131 537 aaKnown RBP13.3□□□□□ -0.28
RTN4-202ENST00000337526 SOCS5O75159 536 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 GJB5O95377 273 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 HSD17B1P14061 328 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 CLCN7P51798 805 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 ABRAXAS2Q15018 415 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 FBXO42Q6P3S6 717 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 TAPBPLQ9BX59 468 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 MS4A12Q9NXJ0 267 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 CNOT11Q9UKZ1 510 aaKnown RBP13.3□□□□□ -0.28
RTN4-202ENST00000337526 CDC14AQ9UNH5 594 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 A0A0J9YVX5 310 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 SMIM30A4D0T7 59 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 MMP20O60882 483 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 ENTPD6O75354 484 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 STATHP02808 62 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 S100A6P06703 90 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 C2orf27AQ580R0 203 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 GALNTL5Q7Z4T8 443 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 CMTR2Q8IYT2 770 aaKnown RBP13.3□□□□□ -0.28
RTN4-202ENST00000337526 METTL21AQ8WXB1 218 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 NKD1Q969G9 470 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 SEZ6LQ9BYH1 1024 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 REEP4Q9H6H4 257 aa13.3□□□□□ -0.28
RTN4-202ENST00000337526 CCRL2O00421 344 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 COCHO43405 550 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 DBIP07108 87 aaKnown RBP13.29□□□□□ -0.28
RTN4-202ENST00000337526 ACRP10323 421 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 ZNF3P17036 446 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 TMEM115Q12893 351 aaPredicted RBP13.29□□□□□ -0.28
RTN4-202ENST00000337526 PDGFRLQ15198 375 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 PLEKHS1Q5SXH7 462 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 CGB2Q6NT52 195 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 ZFAND4Q86XD8 727 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 OR9A1PQ8NGU1 263 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 PMEPA1Q969W9 287 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 CAPNS2Q96L46 248 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 PAAF1Q9BRP4 392 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 HERC2P3Q9BVR0 1158 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 CERS4Q9HA82 394 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 PLEKHA1Q9HB21 404 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 TRIM36Q9NQ86 728 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 ERVK-18Q9QC07 812 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 MGAT4BQ9UQ53 548 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 OR14I1A6ND48 311 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 GRID2O43424 1007 aa13.29□□□□□ -0.28
RTN4-202ENST00000337526 ZNF623O75123 536 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms