RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TPTEP56180 551 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 SRSF11Q05519 484 aaKnown RBP11.87□□□□□ -0.51
VPS33B-201ENST00000333371 TP53BP2Q13625 1128 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 TSTA3Q13630 321 aaPredicted RBP11.87□□□□□ -0.51
VPS33B-201ENST00000333371 ZNF385BQ569K4 471 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 IER5LQ5T953 404 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 AGAP7PQ5VUJ5 663 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 THOC6Q86W42 341 aaKnown RBP11.87□□□□□ -0.51
VPS33B-201ENST00000333371 ELMOD1Q8N336 334 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 WDR20Q8TBZ3 569 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 MRPS31Q92665 395 aaKnown RBP11.87□□□□□ -0.51
VPS33B-201ENST00000333371 OR4K3Q96R72 315 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 ROGDIQ9GZN7 287 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 OR51E2Q9H255 320 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 BRD9Q9H8M2 597 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 IL21Q9HBE4 155 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 GPATCH2Q9NW75 528 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 SUV39H1O43463 412 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 MYO1DO94832 1006 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 ADRA2AP08913 450 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 HLA-EP13747 358 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 HLA-FP30511 346 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 BDKRB1P46663 353 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 SPINT3P49223 89 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 WDR5P61964 334 aaKnown RBP11.86□□□□□ -0.51
VPS33B-201ENST00000333371 DOC2BQ14184 412 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 RGNQ15493 299 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 TIGD6Q17RP2 521 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 Q6ZVU0 165 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 OR9Q2Q8NGE9 314 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 UTP15Q8TED0 518 aaKnown RBP11.86□□□□□ -0.51
VPS33B-201ENST00000333371 GGHQ92820 318 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 SLC38A4Q969I6 547 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 VWCEQ96DN2 955 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 HRASLS5Q96KN8 279 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 PITX2Q99697 317 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 CHST8Q9H2A9 424 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.86□□□□□ -0.51
VPS33B-201ENST00000333371 NDUFAF4Q9P032 175 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 POU2F3Q9UKI9 436 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 LYVE1Q9Y5Y7 322 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 DENND4CQ5VZ89 1909 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 IGLV3-16A0A075B6K0 115 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 C1orf226A1L170 272 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 DSCR3O14972 297 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 SCAMP2O15127 329 aaKnown RBP11.86□□□□□ -0.51
VPS33B-201ENST00000333371 SGTAO43765 313 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 ARHGEF15O94989 841 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 PTHP01270 115 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 LRG1P02750 347 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 ANXA4P09525 319 aaPredicted RBP11.86□□□□□ -0.51
VPS33B-201ENST00000333371 HSMCR30P0CW71 290 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 CYP2A7P20853 494 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 PPM1AP35813 382 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 CRATP43155 626 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 NKX2-5P52952 324 aaPredicted RBP11.86□□□□□ -0.51
VPS33B-201ENST00000333371 CDH12P55289 794 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 MC1RQ01726 317 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 CPTPQ5TA50 214 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 STEAP3Q658P3 488 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 ASTLQ6HA08 431 aaPredicted RBP11.86□□□□□ -0.51
VPS33B-201ENST00000333371 USP45Q70EL2 814 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 GAREM2Q75VX8 874 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 OTOP2Q7RTS6 562 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 LYSMD2Q8IV50 215 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 OR8J2Q8NGG1 315 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 OR5AK3PQ8NH89 298 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 SGK2Q9HBY8 427 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 LTBP2Q14767 1821 aa11.86□□□□□ -0.51
VPS33B-201ENST00000333371 GNG14A0A1W2PPG7 69 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 CARNS1A5YM72 827 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 TNFRSF11BO00300 401 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 TLL1O43897 1013 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 ACRP10323 421 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 HNMTP50135 292 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 PPP5CP53041 499 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 SELENBP1Q13228 472 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 PPIGQ13427 754 aaKnown RBP eCLIP11.85□□□□□ -0.514e-6■■■□□ 15.5
VPS33B-201ENST00000333371 ZNF404Q494X3 552 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 C1orf53Q5VUE5 145 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 UBE2UQ5VVX9 321 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 ERICH5Q6P6B1 374 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 Q6ZVL8 140 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 PGBD3Q8N328 593 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 SLC35B4Q969S0 331 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 Q96MT0 163 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 LYSMD1Q96S90 227 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 BCL7BQ9BQE9 202 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 PSD2Q9BQI7 771 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 CENPOQ9BU64 300 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 MTG2Q9H4K7 406 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 CCNB1IP1Q9NPC3 277 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 FAM120CQ9NX05 1096 aaKnown RBP11.85□□□□□ -0.51
VPS33B-201ENST00000333371 PSORS1C1Q9UIG5 152 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 EXO1Q9UQ84 846 aaKnown RBP11.85□□□□□ -0.51
VPS33B-201ENST00000333371 CLDN24A6NM45 220 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 PBLDP30039 288 aaPredicted RBP11.85□□□□□ -0.51
VPS33B-201ENST00000333371 GRK3P35626 688 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 ETV3P41162 512 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 SNRPD1P62314 119 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms