RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 TCEAL4Q96EI5 215 aa12.57□□□□□ -0.4
VSTM4-202ENST00000332853 EVPLQ92817 2033 aa12.57□□□□□ -0.4
VSTM4-202ENST00000332853 CPED1A4D0V7 1026 aa12.57□□□□□ -0.4
VSTM4-202ENST00000332853 SLC30A4O14863 429 aa12.57□□□□□ -0.4
VSTM4-202ENST00000332853 H1F0P07305 194 aaKnown RBP12.57□□□□□ -0.4
VSTM4-202ENST00000332853 T-ENOLP0DO92 83 aa12.57□□□□□ -0.4
VSTM4-202ENST00000332853 IL18R1Q13478 541 aa12.57□□□□□ -0.4
VSTM4-202ENST00000332853 LETMD1Q6P1Q0 360 aa12.57□□□□□ -0.4
VSTM4-202ENST00000332853 ZSCAN32Q9NX65 697 aa12.57□□□□□ -0.4
VSTM4-202ENST00000332853 COPS7AQ9UBW8 275 aa12.57□□□□□ -0.4
VSTM4-202ENST00000332853 CYP8B1Q9UNU6 501 aa12.57□□□□□ -0.4
VSTM4-202ENST00000332853 TLR4O00206 839 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 LATS1O95835 1130 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 C1GALT1C1LP0DN25 315 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 OR4D2P58180 307 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 ZXDBP98169 803 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 BLOC1S3Q6QNY0 202 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 CCDC116Q8IYX3 515 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 GJD3Q8N144 294 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 PACRGLQ8N7B6 248 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 SMARCD2Q92925 531 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 GSTO2Q9H4Y5 243 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 SNTG1Q9NSN8 517 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 PRORSD1PA6NEY8 169 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 PPP6CO00743 305 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 TNFRSF10BO14763 440 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 SSNA1O43805 119 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 KAT7O95251 611 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 HNRNPA1P09651 372 aaKnown RBP eCLIP12.56□□□□□ -0.4
VSTM4-202ENST00000332853 PRDX3P30048 256 aaKnown RBP12.56□□□□□ -0.4
VSTM4-202ENST00000332853 RCVRNP35243 200 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 OMPP47874 163 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 ZNF423Q2M1K9 1284 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 ZNF542PQ5EBM4 170 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 PRR23BQ6ZRT6 265 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 GALNT10Q86SR1 603 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 SLC39A11Q8N1S5 342 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 CAMKVQ8NCB2 501 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 MALT1Q9UDY8 824 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 RTCAO00442 366 aaKnown RBP12.56□□□□□ -0.4
VSTM4-202ENST00000332853 EEDO75530 441 aaKnown RBP12.56□□□□□ -0.4
VSTM4-202ENST00000332853 KCNA5P22460 613 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 NDUFS1P28331 727 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 MAGEA6P43360 314 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 CRTC2Q53ET0 693 aaPredicted RBP12.56□□□□□ -0.4
VSTM4-202ENST00000332853 ZNF534Q76KX8 674 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 DGAT2Q96PD7 388 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 NKX2-4Q9H2Z4 354 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 KAT8Q9H7Z6 458 aaKnown RBP12.56□□□□□ -0.4
VSTM4-202ENST00000332853 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 MID1O15344 667 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 NPPAP01160 153 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 RPLP0P05388 317 aaKnown RBP12.56□□□□□ -0.4
VSTM4-202ENST00000332853 ARSAP15289 507 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 CD9P21926 228 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 NUP62P37198 522 aaPredicted RBP12.56□□□□□ -0.4
VSTM4-202ENST00000332853 UAP1L1Q3KQV9 507 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 EIPR1Q53HC9 387 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 ARMC3Q5W041 872 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 RFKQ969G6 155 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 TMEM203Q969S6 136 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 TRNAU1APQ9NX07 287 aaKnown RBP12.56□□□□□ -0.4
VSTM4-202ENST00000332853 A0A1W2PQU0 124 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 CA3P07451 260 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 CEBPBP17676 345 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 SGSHP51688 502 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 PIGFQ07326 219 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 ALKBH2Q6NS38 261 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 TCEAL8Q8IYN2 117 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 KDM1BQ8NB78 822 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 OR13J1Q8NGT2 312 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 ALPK1Q96QP1 1244 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 F2RL3Q96RI0 385 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 POLR2J2Q9GZM3 115 aaKnown RBP12.56□□□□□ -0.4
VSTM4-202ENST00000332853 KCNH6Q9H252 994 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 NECTIN3Q9NQS3 549 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 TREX1Q9NSU2 369 aa12.56□□□□□ -0.4
VSTM4-202ENST00000332853 A0A1B0GW55 424 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 E7EQ34 232 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 BTN3A3O00478 584 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 SNPHO15079 494 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 RNGTTO60942 597 aaKnown RBP12.55□□□□□ -0.4
VSTM4-202ENST00000332853 SRPRAP08240 638 aaKnown RBP12.55□□□□□ -0.4
VSTM4-202ENST00000332853 DUX4L2P0CJ85 424 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 DUX4L3P0CJ86 424 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 DUX4L4P0CJ87 422 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 DUX4L5P0CJ88 424 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 DUX4L6P0CJ89 424 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 DUX4L7P0CJ90 424 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 PSMD7P51665 324 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 RPS21P63220 83 aaKnown RBP12.55□□□□□ -0.4
VSTM4-202ENST00000332853 HUS1BQ8NHY5 278 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 TSACCQ96A04 125 aaPredicted RBP12.55□□□□□ -0.4
VSTM4-202ENST00000332853 SCRN2Q96FV2 425 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 RACGAP1Q9H0H5 632 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 DUX4Q9UBX2 424 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 H0YC42 278 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 TMEM189-UBE2V1I3L0A0 370 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 DHPSP49366 369 aaPredicted RBP12.55□□□□□ -0.4
VSTM4-202ENST00000332853 RPS26P62854 115 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms